HMM length of domain: 27 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	19.9	1.5	3.6e-07	0.00047	4	26	39	61
2	28.6	0.5	6.8e-10	8.9e-07	2	25	65	87
3	13.9	3.0	2.9e-05	0.037	2	25	93	115
4	10.7	2.8	0.00028	0.37	3	22	122	140
5	32.2	0.5	4.9e-11	6.4e-08	3	27	146	169

  Alignments for each domain:
  == domain 1  score: 19.9 bits;  conditional E-value: 3.6e-07
                   HCBCHHHHHS--TTGGG-SSBSC CS
        zf-CCCH  4 elCrffmrtGyCkyGdrCkFaHg 26
                   + C f+++ G C  G++C++ H+
  KWMTBOMO06372 39 AVCEFYSQPGGCGNGAQCPYRHV 61
                   57******************997 PP

  == domain 2  score: 28.6 bits;  conditional E-value: 6.8e-10
                   HCHCBCHHHHHS--TTGGG-SSBS CS
        zf-CCCH  2 ktelCrffmrtGyCkyGdrCkFaH 25
                   +t+ C++++r G Ck Gd+C F H
  KWMTBOMO06372 65 RTVVCKHWLR-GLCKKGDQCEFLH 87
                   699*******.************* PP

  == domain 3  score: 13.9 bits;  conditional E-value: 2.9e-05
                    HCHCBCHHHHHS--TTGGG-SSBS CS
        zf-CCCH   2 ktelCrffmrtGyCkyGdrCkFaH 25 
                    k+++C f++r  +C+    C+F H
  KWMTBOMO06372  93 KMPECYFYARFNACHN-KECPFLH 115
                    89**************.******* PP

  == domain 4  score: 10.7 bits;  conditional E-value: 0.00028
                    CHCBCHHHHHS--TTGGG-S CS
        zf-CCCH   3 telCrffmrtGyCkyGdrCk 22 
                     + C+ ++ +G+C++G+ C+
  KWMTBOMO06372 122 IKDCP-WYDRGFCRHGPHCR 140
                    57899.7777*********7 PP

  == domain 5  score: 32.2 bits;  conditional E-value: 4.9e-11
                    CHCBCHHHHHS--TTGGG-SSBSCS CS
        zf-CCCH   3 telCrffmrtGyCkyGdrCkFaHgq 27 
                    ++lC +++  G+C+ G++CkF+H++
  KWMTBOMO06372 146 RVLCINYLA-GFCPDGASCKFMHPR 169
                    89*******.*************95 PP