Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO16721 | zf-C2H2 | 5.4e-19 | 1.2e-05 | 5 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 1.9 0.1 5.6 3.3e+02 10 23 9 23 2 10.4 0.5 0.012 0.69 5 23 38 59 3 22.8 2.4 1.4e-06 8.2e-05 2 23 66 89 4 20.9 1.2 5.4e-06 0.00032 1 23 95 119 5 25.4 0.1 1.9e-07 1.2e-05 1 23 125 149 Alignments for each domain: == domain 1 score: 1.9 bits; conditional E-value: 5.6 ESSHHHHHHHHHC.C CS zf-C2H2 10 FkrksnLkrHirt.H 23 Fk k L+ Hi + H KWMTBOMO16721 9 FKIKNTLVEHIERsH 23 888999*****9999 PP == domain 2 score: 10.4 bits; conditional E-value: 0.012 TTT...EEESSHHHHHHHHHCC CS zf-C2H2 5 dCg...ksFkrksnLkrHirtH 23 +C ++F+ ++ L H+r+H KWMTBOMO16721 38 ECArsrRPFNARYKLLIHMRVH 59 56666699*************9 PP == domain 3 score: 22.8 bits; conditional E-value: 1.4e-06 EET..TTTEEESSHHHHHHHHHCC CS zf-C2H2 2 kCp..dCgksFkrksnLkrHirtH 23 +C+ +Cgk F+r +nLk H r+H KWMTBOMO16721 66 RCHhpGCGKAFSRLENLKIHVRSH 89 69999******************9 PP == domain 4 score: 20.9 bits; conditional E-value: 5.4e-06 EEET..TTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCp..dCgksFkrksnLkrHirtH 23 y Cp +C k F+++s+ +H+rtH KWMTBOMO16721 95 YACPapHCRKAFSNSSDRAKHQRTH 119 78**********************9 PP == domain 5 score: 25.4 bits; conditional E-value: 1.9e-07 EEET..TTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCp..dCgksFkrksnLkrHirtH 23 y C+ +Cgk+++++s+L++Hi++H KWMTBOMO16721 125 YACGaaGCGKRYTDPSSLRKHIKSH 149 789999******************9 PP |
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