| Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
|---|---|---|---|---|---|
| KWMTBOMO00166 | zf-C2H2 | 4.9e-26 | 2.8e-06 | 5 | + View |
HMM length of domain: 23 aa
c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified.
Domain annotation for each sequence:
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to
-- ----- ---- -------- -------- ------- ------ ------- ------
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 26.1 1.7 1.2e-07 7.1e-06 1 23 37 59
2 13.1 0.0 0.0016 0.096 2 23 69 90
3 21.9 0.3 2.6e-06 0.00016 1 23 94 116
4 27.4 0.6 4.7e-08 2.8e-06 3 23 124 144
5 16.4 1.8 0.00015 0.0087 1 20 150 169
Alignments for each domain:
== domain 1 score: 26.1 bits; conditional E-value: 1.2e-07
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y+C++Cgk++ ++snL rH +tH
KWMTBOMO00166 37 YTCSECGKRYATSSNLSRHKQTH 59
9*********************9 PP
== domain 2 score: 13.1 bits; conditional E-value: 0.0016
EETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23
+C++Cgk + + L H tH
KWMTBOMO00166 69 RCGECGKAYVSMPALAMHVLTH 90
7*******************99 PP
== domain 3 score: 21.9 bits; conditional E-value: 2.6e-06
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
++C++Cgk F+r+ +L+ H+r+H
KWMTBOMO00166 94 HVCGVCGKLFSRPWLLQGHLRSH 116
79********************9 PP
== domain 4 score: 27.4 bits; conditional E-value: 4.7e-08
ETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23
C +Cgk F ++snL++H++tH
KWMTBOMO00166 124 CAHCGKAFADRSNLRAHMQTH 144
99******************9 PP
== domain 5 score: 16.4 bits; conditional E-value: 0.00015
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20
++C+ C+k+F ks L++H+
KWMTBOMO00166 150 FECSRCHKTFALKSYLNKHQ 169
89*****************8 PP
|
|||||

渝公网安备 50010602502065号