Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO16653 | zf-C2H2 | 1.5e-16 | 5.6e-05 | 9 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 8.0 8.9 0.066 4 1 23 237 259 2 1.9 1.0 5.8 3.5e+02 2 23 281 301 3 16.4 0.4 0.00015 0.0088 1 23 309 331 4 6.6 1.4 0.19 11 1 23 349 372 5 10.6 6.3 0.0097 0.58 1 23 382 404 6 15.8 0.7 0.00023 0.013 2 23 411 432 7 20.2 0.5 8.7e-06 0.00052 2 23 439 460 8 23.3 1.6 9.3e-07 5.6e-05 1 23 466 488 9 4.4 0.4 0.9 54 1 13 494 506 Alignments for each domain: == domain 1 score: 8.0 bits; conditional E-value: 0.066 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y+C +C k +k ks L +H++tH KWMTBOMO16653 237 YRCCICLKNCKFKSTLLKHYKTH 259 9*********************9 PP == domain 2 score: 1.9 bits; conditional E-value: 5.8 EETTTTEEESSHHHHHHHHHCC CS zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23 kC+ C ks k+ H + H KWMTBOMO16653 281 KCTRCRKSV-KKDTWAEHWQNH 301 8999*9999.777777776666 PP == domain 3 score: 16.4 bits; conditional E-value: 0.00015 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y+C C+ksF+++ + ++H +H KWMTBOMO16653 309 YRCALCDKSFTSSQQVMVHGLSH 331 9******************9888 PP == domain 4 score: 6.6 bits; conditional E-value: 0.19 EEETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23 y+C+ C++ F L++H+ H KWMTBOMO16653 349 YVCDFCPEEFMYMRCLQAHRTNaH 372 99*****************98777 PP == domain 5 score: 10.6 bits; conditional E-value: 0.0097 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 ++C +C++ F + +L+rH +tH KWMTBOMO16653 382 HRCWKCSRQFAHLNSLRRHFMTH 404 79*******************99 PP == domain 6 score: 15.8 bits; conditional E-value: 0.00023 EETTTTEEESSHHHHHHHHHCC CS zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23 C++Cgk +++++Lk Hi++H KWMTBOMO16653 411 LCNVCGKAMSSRDHLKLHINIH 432 5*******************99 PP == domain 7 score: 20.2 bits; conditional E-value: 8.7e-06 EETTTTEEESSHHHHHHHHHCC CS zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23 +C+ Cgk F ksnLk H r+H KWMTBOMO16653 439 VCSTCGKGFVKKSNLKLHERVH 460 6*******************99 PP == domain 8 score: 23.3 bits; conditional E-value: 9.3e-07 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y+C++Cgk F+++s L+ H r H KWMTBOMO16653 466 YVCSHCGKAFSQRSTLVIHERYH 488 9********************99 PP == domain 9 score: 4.4 bits; conditional E-value: 0.9 EEETTTTEEESSH CS zf-C2H2 1 ykCpdCgksFkrk 13 y+C Cg+ F k KWMTBOMO16653 494 YVCALCGRGFVAK 506 99*******9765 PP |
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