HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	16.8	0.6	0.00011	0.0063	1	23	110	132
2	16.5	0.2	0.00013	0.008	1	23	138	160
3	20.3	1.0	8.3e-06	0.0005	1	23	166	188
4	23.5	2.1	8e-07	4.8e-05	3	23	196	216

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 0.00011
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y Cp+C + ++ k++L++H+++H
  KWMTBOMO16570 110 YCCPECQMAYREKDELEQHLSVH 132
                    89*******************99 PP

  == domain 2  score: 16.5 bits;  conditional E-value: 0.00013
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    + C++Cg   krk++L+rH   H
  KWMTBOMO16570 138 FICGICGAGLKRKEHLERHKLGH 160
                    78*****************9877 PP

  == domain 3  score: 20.3 bits;  conditional E-value: 8.3e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C++C+k Fkr+++L+ H   H
  KWMTBOMO16570 166 YVCSVCTKGFKRREHLNLHAVLH 188
                    9******************8777 PP

  == domain 4  score: 23.5 bits;  conditional E-value: 8e-07
                    ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                    C++Cgk F rk++L++H r+H
  KWMTBOMO16570 196 CGECGKGFYRKDHLRKHTRSH 216
                    ********************9 PP