HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	13.0	2.5	0.0017	0.1	1	23	246	269
2	20.7	2.7	6.4e-06	0.00038	2	23	277	298
3	1.8	0.9	6.3	3.8e+02	1	23	302	324
4	17.2	2.0	8.2e-05	0.0049	1	23	329	352
5	6.5	0.4	0.2	12	3	23	359	380

  Alignments for each domain:
  == domain 1  score: 13.0 bits;  conditional E-value: 0.0017
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    ++C+ C ks+ + +nL++H ++ H
  KWMTBOMO16476 246 FRCSLCYKSYMDDDNLNKHFKKlH 269
                    89******************9999 PP

  == domain 2  score: 20.7 bits;  conditional E-value: 6.4e-06
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C++C+ ++++k +LkrH++tH
  KWMTBOMO16476 277 VCDICKTRYRDKKMLKRHMKTH 298
                    6********************9 PP

  == domain 3  score: 1.8 bits;  conditional E-value: 6.3
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    + C  C+ +   +s+ + H+++H
  KWMTBOMO16476 302 FACRQCKHVSILSSQAVEHYNMH 324
                    78********9999999999999 PP

  == domain 4  score: 17.2 bits;  conditional E-value: 8.2e-05
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    ykC  C+k++  +  + +Hir  H
  KWMTBOMO16476 329 YKCQNCDKTYDKQTTYLAHIRYsH 352
                    9********************988 PP

  == domain 5  score: 6.5 bits;  conditional E-value: 0.2
                    ETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirt.H 23 
                    C+ Cg+s+ +   Lk H++  H
  KWMTBOMO16476 359 CELCGESYVSETGLKCHQNLvH 380
                    99*************9999888 PP