HMM length of domain: 47 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	48.0	1.4	9.3e-16	9.3e-13	1	46	43	87
2	65.0	2.0	4.7e-21	4.7e-18	1	47	94	140
3	54.7	0.4	7.8e-18	7.8e-15	1	45	146	189

  Alignments for each domain:
  == domain 1  score: 48.0 bits;  conditional E-value: 9.3e-16
                   CSSS-HHHHHHHHHHHHHHTTTTHHHHHHHHSSS-HHHHHHHHHHH CS
            MYB  1 rgkWteeEdelLleaveklGngnWkkIakelggRtakqcrsrwqny 46
                   rg+W++eEd++L+ +v+ +  + W++Ia+e++ R++ qc  rw ++
  KWMTBOMO16431 43 RGRWSKEEDKKLKAYVRTYKEN-WERIAAEFPDRSDVQCLQRWTKV 87
                   89*****************977.********************875 PP

  == domain 2  score: 65.0 bits;  conditional E-value: 4.7e-21
                    CSSS-HHHHHHHHHHHHHHTTTTHHHHHHHHSSS-HHHHHHHHHHHT CS
            MYB   1 rgkWteeEdelLleaveklGngnWkkIakelggRtakqcrsrwqnyl 47 
                    +g+Wt+eEde+ +e+v+k+G++ W++Ia++l gR +kqcr+rw+n+l
  KWMTBOMO16431  94 KGPWTKEEDEKVVELVAKYGPKKWTLIARHLKGRIGKQCRERWHNHL 140
                    79*******************************************97 PP

  == domain 3  score: 54.7 bits;  conditional E-value: 7.8e-18
                    CSSS-HHHHHHHHHHHHHHTTTTHHHHHHHHSSS-HHHHHHHHHH CS
            MYB   1 rgkWteeEdelLleaveklGngnWkkIakelggRtakqcrsrwqn 45 
                    + +Wte Ed  +++a+++lGn  W+kIak+l+gRt++ ++++w++
  KWMTBOMO16431 146 KTAWTEHEDRVIYQAHQQLGNQ-WAKIAKLLPGRTDNAIKNHWNS 189
                    579*******************.********************96 PP