HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	8.3	8.9	0.054	3.3	1	23	209	231
2	16.6	0.4	0.00012	0.0072	1	23	281	303
3	6.9	1.4	0.15	9.3	1	23	321	344
4	10.9	6.3	0.008	0.48	1	23	354	376
5	16.1	0.7	0.00019	0.011	2	23	383	404
6	20.5	0.5	7.1e-06	0.00043	2	23	411	432
7	21.3	0.3	3.9e-06	0.00023	1	21	438	458

  Alignments for each domain:
  == domain 1  score: 8.3 bits;  conditional E-value: 0.054
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C +C k +k ks L +H++tH
  KWMTBOMO16036 209 YRCCICLKNCKFKSTLLKHYKTH 231
                    9*********************9 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 0.00012
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C  C+ksF+++ + ++H  +H
  KWMTBOMO16036 281 YRCALCDKSFTSSQQVMVHGLSH 303
                    9******************9888 PP

  == domain 3  score: 6.9 bits;  conditional E-value: 0.15
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    y+C+ C++ F     L++H+   H
  KWMTBOMO16036 321 YVCDFCPEEFMYMRCLQAHRTNaH 344
                    99*****************98777 PP

  == domain 4  score: 10.9 bits;  conditional E-value: 0.008
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C +C++ F +  +L+rH +tH
  KWMTBOMO16036 354 HRCWKCSRQFAHLNSLRRHFMTH 376
                    79*******************99 PP

  == domain 5  score: 16.1 bits;  conditional E-value: 0.00019
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                     C++Cgk  +++++Lk Hi++H
  KWMTBOMO16036 383 LCNVCGKAMSSRDHLKLHINIH 404
                    5*******************99 PP

  == domain 6  score: 20.5 bits;  conditional E-value: 7.1e-06
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C+ Cgk F  ksnLk H r+H
  KWMTBOMO16036 411 VCSTCGKGFVKKSNLKLHERVH 432
                    6*******************99 PP

  == domain 7  score: 21.3 bits;  conditional E-value: 3.9e-06
                    EEETTTTEEESSHHHHHHHHH CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHir 21 
                    y+C++Cgk F+++s L+ H r
  KWMTBOMO16036 438 YVCSHCGKAFSQRSTLVIHER 458
                    9******************76 PP