Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO15767 | zf-C2H2 | 5.7e-18 | 4e-06 | 3 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 23.1 0.5 1.1e-06 6.4e-05 1 23 192 214 2 26.9 1.2 6.7e-08 4e-06 1 23 220 244 3 23.9 3.3 5.8e-07 3.5e-05 1 23 250 272 Alignments for each domain: == domain 1 score: 23.1 bits; conditional E-value: 1.1e-06 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 ykCp+C+ F+++ +Lk Hir+H KWMTBOMO15767 192 YKCPHCNVGFSNNGQLKGHIRIH 214 9*********************9 PP == domain 2 score: 26.9 bits; conditional E-value: 6.7e-08 EEET..TTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCp..dCgksFkrksnLkrHirtH 23 ykC+ CgksF+r+++L+rH r+H KWMTBOMO15767 220 YKCDekNCGKSFTRNEELTRHKRIH 244 9**********************99 PP == domain 3 score: 23.9 bits; conditional E-value: 5.8e-07 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 ++C Cgk+F r+++Lk+H rtH KWMTBOMO15767 250 FPCATCGKKFGRRDHLKKHTRTH 272 89********************9 PP |
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