Silkworm Genome Informatics Database

Gene

KWMTBOMO05841

Pre Gene Modal

BGIBMGA006957

Annotation

PREDICTED:_zinc_finger_protein_Xfin-like_[Papilio_machaon]

Location

Bomo_Chr10(+):11878771-11887201 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.102

CDS

ATGAATGTGAACTATGATAGTGTTTGTAGACTGTGCTTGTCAGCTCGTGGCGAATTACTGCCCATTTTTCCTACCACCAGTTCCGATGACTCTGAACCTCACGTCCTCGCTTCAAAAATTAAGGATTGCGTATCGGTTGAGATAACCGAAAATGACGACTTGCCGACAAATGTCTGTAAGAAGTGCATGGATAATGTCAACAATTGGCATATTTTCAAGGATGTATGTGAAAGAACACAAACCAAACTGATACAGTTGATTAATAAAGATGGCAACCAACTAGAAGAGGTGAAAGTAAAAAATGAACCACTGTCAGATGAAGCATATGATGAAGGAGTGGTTATTGATGGCTCTTACCCCGATAATGAGACCCAAAGCTCCCATAAATTACAACCGGAAGGCCCACCCATCTTGACATCGCTTGGGCTCACACCGAGGAGTGATAAGACATGCATAGACCCCCGTATGGATTGGCATCGGGTGCATGCAATATTGAACATGGTACAAGACAGTGAAGTTATTGATTCCCTACAAACAACAGAAGAACGTGATGTACTCCACTGCTCTGACCATGATTCTTCATCAGAATCTGAACTACAGGACCATCTCGATGACTCCTTCCTTGACTCTAAAATGGGTTATGTCTGTAAAAATCGTGAAATTATTTCTAAAACACCACAAGTAATATCGCCGTCTGTGAACCCAAAAGAACATTTGAAGTCTAGGAAACTGAGAGCATTTGAGCCAAAATACATACAAAATATTGAAACTGCTTGGCAACAATACTTCTCGGATGATTTGCTCGAACAGATTGTCACTTCTACAAATGATCATCTGGGTCAAAACGAAATAAGTTTCACAGACATTCGGGAAATAAAAACATTAATAGGGGTCCTTTATCTACATGGCATATATAGACCCACTCATCAAAAATGTAGTGATCTTTGGGATGACGTCTGTGGAGTACCATGCATTAGAAGTGCTATTACATATGATCGATTTAAGTTCCTCCTTGAGAATATGCGTTTTGAAAAAAACTGTGCTAAGAGTAACGTTCCACTTGATCCTATGCGTCGTATTCGTAAAGTATTTGAAATCTTCGCTCTGAATTGTAGAACCTCTTTTGATGTAAAGAACACTGCAGTTATTGATGAGATCATTGTACCCGTTTATGGACCATGTCCATTTCGTTACGAGATTGATAAGAAATCATTGAAACGTGGCATCAAAATGGTACTTCTTGTTGACCCAAACAACTTTTATGTAACAAATTTGGATGTTATTAGTGATCCTTATTTTGGTGCCGAAGAAGTTGTAAAAAAAATGGTTCAGCATTTAGTCAACACTGAGAGAACAATTGTCATGGACAGCTGGTTCACATCCTTTACTTTGATGGAAATTTTGAAGAATGAATATCAACTTTTTACTGTTGCAGCATTAAAAACAAGCCATCATCATATACCACCTGCATTTTTATCACCCTACAGAAAATGTAAATCTGTCATGACCGGTTTTCTCCAGGATAGCACTTGTATTACATCTTACGTTACTTCTGAATCTAAATGTGTTAACGTTATATCAAATGATCCAAGATATTATCACAAGGGTAGACACATCGGCAATTCGACAGTTGGAGTAGAAAGCGAAAAAGATGAAGAAGATGATGAAGATGAAGACGTGAATAATGTAGCCGCGCCTCTTGCGAAAGTATCAAACATGCCTGAAGTTTCTATTACGGTTATGCGTCCCACTGGTGAGACCCTACACGCCCGCCAAGGCATTCAACAAATAGCGTCAAAAGATTGTCTTGTTTGTGGACGCAGCTACAGATACTCACACAACGCCAGGCGACATGAGTTGACCGCGCATAGTTTTGATAGGTACACTAACAAAACCACGACGAAAAAGTCTCGTACACATCTACAGCCGAAATTGAGGCCTAATCCATTTAATCCCAAGGCGCGACTTATGCCTAATCCTATCAGTCACAAAATCCAGTTCAAAAACATCCCGATCGTCAATGCGTCGAAAGCGGGTCCACCGAAACCAATTCCTATTAAAACTGTAAATTCTAAAGTTACACAAAATAATTTACCATATCCCCTTCGTATTAAAGCACTAAAAGACTTGCAAATCAAGAAAAAAGAACCGCAAATTTTGAAAACACTCCTAACAACAAAACCGGAAGTTTTAGTTTCTGAACCAGAAATTATGAATTCGGGTCCTGAAAGTCCCGAAACTTTGATATCGGAACCAGAAATAGCATCGTTTCAGGTAGAAACTATTTTATCTGAGGCCGACCCTGATGCTTATGATCAGCAAGGTGACGACGAAGCGGAAGGTGAAGTAAATGACAGTCAAAATCAGAACTATGACACAGTAGATATGGATTCTGAAAACGAGATCGAAATTGCACGTCAGCGCGAAGAAGTGGATGACGATAAGAAACATGACGAGCAAGATAATGCAGATTATAATGAAAATCATGATGAGAATATGCAGAGTGATACCGAAAAGGATCATAATGAAGACACAGCGGACAGTCAAGAGAATCCGATGGTTGACGAAAATATTCATATAAAGTATGAAGATCATGAAGATAAAGATAATGAAGATAATCAAGATGAAAATGATGATTACGATGAAGACTATGTCCCTCCCGAAGGTCTCGCTCCCGTTGTCGAGATAAACGAGGACATGCAAACAAATTCATATCTTAGCGAAATGAACGAAGAGGAGGAGGAACTCGATGAAACAGCCCAGTCAGGTGAAGCGATTGATCCCAACGACGCTACGGTTGAAGAAGAAGAGAAACCTGCTAAGGTTTTAGACCCTGATAAAGTTTACGTGACTAAATCTCAAAGAGATTTTATAAATAAACATCGCGATATAATTGAGCAAATTAACACTAAGCGATGTCTGTGCTGTGACAGAGAACATCCGCGCAGGAAAGCGGTTATACAACATCTACAGAAAAACGGGCACAAGGTTCCTAAACACACCTGCTACAATTGTGTTGTAACTTTCGGCCACATCGGCGCGCTGCTCAGTCATATGCGATCGAATTCGTGTACGGATCTGTGGAAAATAATTTACGACGAAAACGGCATCACCGACGATATCGTGATAGAGGATGAACCTGTGCCTGTGGACGTCAAAGTTCAGTATAAAGATATCTTCAATGCTAGAAACATCCAATATTTTAATGATCATGCCGTTGCTGTACATGCCGGTACCCTTGATCAGTCTGAAACCTTGACCAAGTGTGTGGACGGTAGGCCAACCGACTGTCCCGTCTGTGGAAAGAAGAACACAAACTATCCTAGTTTGGTGAAACATTTGAAAATCATACACGGCGAAGATAAACCTCATTTCTGTCAGCATTGCGATTCCAAATTTGAACAAGCCGCTGATCTAAACAAGCACATATACACGGAGCATTCGGATAGGACCTTAGGCGTTCAAAGCCATGAACCTGACATGACTCTCGTTAAAGAAGAGGCCGAAGAGTATCATTATTCATGTACTGAATGCAATGCGATTTTTGAAACAGTTGACGCATGGACTGACCACCAAGTTGCCGAACACAATCAGGTGGCACATCATTGCGATCAATGCGAAAAGAAATTTTTACGACCTTCAGAACTCGCGGAACACAAGAACACCCACTTGCGAGTGAAATTTTACCCTTGCAGTCTGTGCTCTAATTCCTACAGTACTCCGCAGAAACTTGCCGACCACGTTCAGCAAATCCATCCTGGAGCCGGGAATACCCCCACCGATGCAGAATTTTACTGCGACATATGCATCAGGTCTTTCAAAAGTCGCCAGGCGTATTCTAATCACATGCGCATTCATGCTAAAGTGCCGACGACTAATAGGAAACCGGGAGATCCTAAGAGTTTTGCTCCACAAATCATCGGGAAGCCAATTAAGTCTTATCCTGGTGTTCAACCAGGCTTTGTATCGTTTAAACCGAATTATAGTAATATCCCTAATGCTCCGTATTGTTGCGATATTTGTGGTAAAGGTTTTATGCACAAGAAAAATATTTGGAAGCATAAAAAGGTATTACACGCTGATCTCTTGAACGACAGAAATGACAGTGAAGAGAATACTATGCATGCCTCCACCGAAGAGGATGAATATAATCCAGATGAAAATGGTACGATTTTGTCGACACCGCAGTTTAATAGTTTTAACTTTGCTAATTTCAATAATACGCAGCCGACTCAACCACAACCCGAATTACCTTATTCATGTGAATTGTGCTATCAACGATTTCCGGTCAGGAATGCTTTGTGGAAACATAAGCGTAATAAACACGGAATTATTAATCCGAATATGGGCTCCGGTTCTGATAATCACACGCAGTCCACAAGCGAGAGGGGCGACACCAGTAGCAGGTCAAGTTGCACGATATGCAAAATCAATTTCGCCGATAAAAAGTCGTATTATCGTCACAGGAAGAACTTTCACAAGACTTCTGTGCAAATGTGCAAAATATGTGGCAAACCGTTGAGTTCTACGTTGGAGCTTTACGAACATCTGAAGGCTGCACACGCCCGTGAATTGCTCGGTTATAACGCCAATCAGGTCACGAGTAGTAAATCTCAAGACACCTCACAAGATGTGGACGGAGACTACGATAACGATCAAGACACCGGCGACGCGAACGTCGACTATCAAGCCAGGTATCCCTGCGAAGCGTGCGGCAAACAGTTCGTAGGACTGCTGGCTTTACAGAACCATCAGTGCGTTAATCAACTCCCCCAGCAGCCGCAGACTTTTGAATGCGAAATATGTCACAAGAGCTACACTTCGATATCAGCTCTGAAGAGCCACCGCGGTTGGCACCTTCGTTCGCCGGACGGAAAAGCTGCTGCCAATAATTCAGGCCTGTGGATGCCACAGCACAAAGTTTCCCACAAAGTCAGTAAACATGAAATCGTCGATGCCTCGCAACTGGCTCGCGTTCAACATTCGACGCCGACTCCGGCATCCGTTGCCAAAAGAAGATTGCCACCAGAGGTTGAAGTCACAGTTGTGAACCCTAATAAGAAGTTGCGATCTGACGACTCTATAGAGACAGACCAACAGAGTACAGGACCTCTTGAAGACAGATACTGTGGCATTTGCGACAAAGAGTTCACGAAACGCGCAGCCTACCAACGTCATATGGATGAGGTCCATCAACCGAATTCAGTTTTTTGTCCTGTTTGCGATAAAAGCTTCACGAGAAAGTCTACTTTGATCGTACATATGAAGAAGCATTACGAAAGCGGCGAAGGAAGTTCCTCTGCTACTGGCTTAGGAGATGAAGAGGTGCACGCTTGCGATCTTTGCGGCGCGCAGTACGATAATGCTGATGCGCTGAGGTCTCACAAAATGAGACATCACGGCGAGGAGGAATCCGGAGATTCCGAAGACGACGGTAACGGCGTGGTGGACCCTCCCGGGGAATTTACATGCGCTCAGTGTGGGGACGGGGTGGCCACCCCACGGGACCTCATCGCCCACCGAACAATGCACGCGACTCCCACCAAATTTTTCTGCAACATTTGCAAAGTATATTTTGCGAGGGCCCTAGACCTGTCCACACACACGCGGGCGCGACACTCCGACAACGAAAAGGTCTACTTCCCCTGTGCTATGTGCGACCGTTCATACATGAACAAAAAGAGTTTACAGAGACACATAGAAATGTCTCACTGA

Protein

MNVNYDSVCRLCLSARGELLPIFPTTSSDDSEPHVLASKIKDCVSVEITENDDLPTNVCKKCMDNVNNWHIFKDVCERTQTKLIQLINKDGNQLEEVKVKNEPLSDEAYDEGVVIDGSYPDNETQSSHKLQPEGPPILTSLGLTPRSDKTCIDPRMDWHRVHAILNMVQDSEVIDSLQTTEERDVLHCSDHDSSSESELQDHLDDSFLDSKMGYVCKNREIISKTPQVISPSVNPKEHLKSRKLRAFEPKYIQNIETAWQQYFSDDLLEQIVTSTNDHLGQNEISFTDIREIKTLIGVLYLHGIYRPTHQKCSDLWDDVCGVPCIRSAITYDRFKFLLENMRFEKNCAKSNVPLDPMRRIRKVFEIFALNCRTSFDVKNTAVIDEIIVPVYGPCPFRYEIDKKSLKRGIKMVLLVDPNNFYVTNLDVISDPYFGAEEVVKKMVQHLVNTERTIVMDSWFTSFTLMEILKNEYQLFTVAALKTSHHHIPPAFLSPYRKCKSVMTGFLQDSTCITSYVTSESKCVNVISNDPRYYHKGRHIGNSTVGVESEKDEEDDEDEDVNNVAAPLAKVSNMPEVSITVMRPTGETLHARQGIQQIASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKTTTKKSRTHLQPKLRPNPFNPKARLMPNPISHKIQFKNIPIVNASKAGPPKPIPIKTVNSKVTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEADPDAYDQQGDDEAEGEVNDSQNQNYDTVDMDSENEIEIARQREEVDDDKKHDEQDNADYNENHDENMQSDTEKDHNEDTADSQENPMVDENIHIKYEDHEDKDNEDNQDENDDYDEDYVPPEGLAPVVEINEDMQTNSYLSEMNEEEEELDETAQSGEAIDPNDATVEEEEKPAKVLDPDKVYVTKSQRDFINKHRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYDENGITDDIVIEDEPVPVDVKVQYKDIFNARNIQYFNDHAVAVHAGTLDQSETLTKCVDGRPTDCPVCGKKNTNYPSLVKHLKIIHGEDKPHFCQHCDSKFEQAADLNKHIYTEHSDRTLGVQSHEPDMTLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSLCSNSYSTPQKLADHVQQIHPGAGNTPTDAEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKSFAPQIIGKPIKSYPGVQPGFVSFKPNYSNIPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMHASTEEDEYNPDENGTILSTPQFNSFNFANFNNTQPTQPQPELPYSCELCYQRFPVRNALWKHKRNKHGIINPNMGSGSDNHTQSTSERGDTSSRSSCTICKINFADKKSYYRHRKNFHKTSVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQVTSSKSQDTSQDVDGDYDNDQDTGDANVDYQARYPCEACGKQFVGLLALQNHQCVNQLPQQPQTFECEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVSHKVSKHEIVDASQLARVQHSTPTPASVAKRRLPPEVEVTVVNPNKKLRSDDSIETDQQSTGPLEDRYCGICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGSSSATGLGDEEVHACDLCGAQYDNADALRSHKMRHHGEEESGDSEDDGNGVVDPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSTHTRARHSDNEKVYFPCAMCDRSYMNKKSLQRHIEMSH

Uniprot

A0A2H1VHF0 A0A194QQT6 A0A212FKH0 A0A194Q890 A0A1E1WQI2 A0A3S2NRX5 + More
A0A0L7LSB1

Pubmed

26354079 22118469 26227816

EMBL

ODYU01002338 SOQ39704.1 KQ461175 KPJ07868.1 AGBW02008031 OWR54245.1 + More
KQ459302 KPJ01743.1 GDQN01001794 JAT89260.1 RSAL01000003 RVE54827.1 JTDY01000198 KOB78337.1

Proteomes

UP000053240 UP000007151 UP000053268 UP000283053 UP000037510

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF13843   DDE_Tnp_1_7

Interpro

IPR013087   Znf_C2H2_type        + More
IPR012934   Znf_AD
IPR029526   PGBD
IPR036236   Znf_C2H2_sf
IPR003604   Matrin/U1-like-C_Znf_C2H2

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A2H1VHF0 A0A194QQT6 A0A212FKH0 A0A194Q890 A0A1E1WQI2 A0A3S2NRX5 + More
A0A0L7LSB1

PDB

5WJQ E-value=5.20925e-13, Score=187

KEGG

101736513 no KO assigned | (RefSeq) zinc finger protein 672

GO

GO:0005634 GO:0008270 GO:0003676 GO:0046872 GO:0051287 GO:0005216 GO:0006811 GO:0006541 GO:0016812 GO:0016597

Length:

1904

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00417

Exp number, first 60 AAs:

0.00078

Total prob of N-in:

0.00006

outside

1 - 1904

Pi

197.928767

Theta

183.084421

Tajima's D

0.077221

CLR

538.682817

CSRT

0.390530473476326

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics