HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	3.7	0.8	1.6	94	3	23	102	121
2	21.1	1.3	4.5e-06	0.00027	1	23	128	150
3	7.6	0.4	0.089	5.3	1	23	156	178
4	24.0	2.7	5.6e-07	3.4e-05	1	23	184	206
5	19.1	5.5	2e-05	0.0012	2	23	213	235
6	14.3	1.0	0.00066	0.04	3	23	243	264

  Alignments for each domain:
  == domain 1  score: 3.7 bits;  conditional E-value: 1.6
                    ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                    Cp+C k   +ks +k H+  H
  KWMTBOMO15606 102 CPICEKLV-HKSKYKEHLADH 121
                    9***9888.888888888766 PP

  == domain 2  score: 21.1 bits;  conditional E-value: 4.5e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C++C k F+ +s +k+H+ tH
  KWMTBOMO15606 128 YVCEYCAKEFRYQSAFKTHQLTH 150
                    9*********************9 PP

  == domain 3  score: 7.6 bits;  conditional E-value: 0.089
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C  C+++     + k+H rtH
  KWMTBOMO15606 156 YQCQFCPYKAQYLGLIKVHVRTH 178
                    9*********************9 PP

  == domain 4  score: 24.0 bits;  conditional E-value: 5.6e-07
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ykCp+C+ +F +ksnL++Hi++H
  KWMTBOMO15606 184 YKCPHCPSKFITKSNLNQHIQRH 206
                    9*********************9 PP

  == domain 5  score: 19.1 bits;  conditional E-value: 2e-05
                    EETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirt.H 23 
                    kC+ C+k F rksn+++H++t H
  KWMTBOMO15606 213 KCHTCNKYFYRKSNMEKHYSTkH 235
                    8*******************999 PP

  == domain 6  score: 14.3 bits;  conditional E-value: 0.00066
                    ETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirt.H 23 
                    C+ Cg  F++++++ +H+ + H
  KWMTBOMO15606 243 CDMCGTGFSHRDEMLSHQLRmH 264
                    *******************999 PP