HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	19.8	2.8	1.2e-05	0.0007	1	23	197	219
2	11.0	4.5	0.0073	0.44	2	23	224	246
3	15.3	1.0	0.00033	0.02	1	23	252	274
4	23.3	1.2	9.3e-07	5.6e-05	1	23	280	302
5	10.7	2.8	0.0093	0.56	1	23	308	331
6	11.6	1.2	0.0047	0.28	1	23	338	361

  Alignments for each domain:
  == domain 1  score: 19.8 bits;  conditional E-value: 1.2e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ykCp C+k F+ k  +k+H+r H
  KWMTBOMO14895 197 YKCPTCSKEFRMKATYKAHMRFH 219
                    9********************98 PP

  == domain 2  score: 11.0 bits;  conditional E-value: 0.0073
                    EETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirt.H 23 
                    +C+ Cgk+++++ +L+ H r  H
  KWMTBOMO14895 224 VCESCGKRCRNNNQLQEHKRArH 246
                    8******************9888 PP

  == domain 3  score: 15.3 bits;  conditional E-value: 0.00033
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC +C +s  +k+ L+ H r+H
  KWMTBOMO14895 252 HKCAYCEYSSATKEALTIHERRH 274
                    79********************9 PP

  == domain 4  score: 23.3 bits;  conditional E-value: 9.3e-07
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C++Cg +F r+snL++Hi +H
  KWMTBOMO14895 280 YVCDHCGATFHRRSNLVQHIAIH 302
                    9*******************999 PP

  == domain 5  score: 10.7 bits;  conditional E-value: 0.0093
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    ++C+ C+k+ k+k  L+ H    H
  KWMTBOMO14895 308 FQCDMCPKRLKSKKFLQIHKHNaH 331
                    89*****************98777 PP

  == domain 6  score: 11.6 bits;  conditional E-value: 0.0047
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    y Cp+C  +F  +   ++H r+ H
  KWMTBOMO14895 338 YLCPICEHRFEKPNKVRAHTRRvH 361
                    66********************99 PP