Silkworm Genome Informatics Database

Gene

KWMTBOMO14895

Pre Gene Modal

BGIBMGA012174

Annotation

PREDICTED:_zinc_finger_protein_808-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr24(+):17232791-17243605 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.619

CDS

ATGTTGGCGGTTTTACTTTTAAACCGCATGAATATAATGGCGAATAGACATCGCACAAAACGTCGGGAAAAACTTGAGAATTCTTGTAAATTAGCCTCTGAGGCCAATGAGGACGGTTACTGCAGAACGTGTCTCGGTACCGAGGATCTATCGCCGATATTTAACGAGAAACAAACCGAGGAGAAACGTACGCGCGAACTAAAAGTTACAACTGGTTTACAGATTAAGAAAAATGATGGTCTATCACAGAGGATATGTTCTGGTTGTTTGGACTCATTGAACCAAGCATTGAAGTTCAGAAGGAAAAGTAAAAAAACAGAGAAAACGTTACTAAATAGGATATCAGGGAATAAAACAAAAAAGAAATACACTAAAATATCTAAAGCCTTAAAGAGACCCAAGATTAAGAAACTAGATGAGGACATCCCAGACTACGAGTACAGTGCCTTCGAAGACAGTTTCCAAGATGAACAAGACTACAAGCAGGATGACCAGAACTTTGTCGATATTAAAGAGGAAAAGATTGAGATCAAGCCGAAGGTGTCGCGCGCGCGTCGGCCGCGCCCCGCGTGTCCCGCCCAGGCCTCGTACAAGTGCCCGACCTGCAGCAAGGAGTTCCGCATGAAGGCCACCTACAAGGCCCACATGCGGTTCCACACTAACTACTGTGTGTGCGAGTCGTGCGGCAAGAGATGCCGCAACAACAACCAGCTGCAGGAGCACAAGCGCGCGCGGCACGGGCTCGGCCGGATCCACAAGTGTGCGTACTGCGAGTACAGCTCGGCCACTAAGGAGGCGCTCACAATCCACGAGCGGCGCCACACCGGCGAGCGTCCGTACGTGTGCGACCACTGCGGCGCCACCTTCCACCGCCGCTCCAACCTCGTGCAGCACATCGCCATCCACCTGCCCGAGAAGAACTTCCAGTGCGACATGTGCCCGAAGCGCTTGAAGTCGAAGAAGTTCCTCCAGATACACAAGCACAACGCCCACACGGGCAAGCGGTACGGGTACCTCTGCCCAATATGCGAGCACCGGTTCGAGAAGCCGAACAAGGTGCGCGCCCACACCAGGAGGGTCCACGGGCTCCCGGACGACCAGCAGGGGCCCGTCGTCAGGGTGCAGCTGGCCCCTGGACCACAGCGCATATCGTAA

Protein

MLAVLLLNRMNIMANRHRTKRREKLENSCKLASEANEDGYCRTCLGTEDLSPIFNEKQTEEKRTRELKVTTGLQIKKNDGLSQRICSGCLDSLNQALKFRRKSKKTEKTLLNRISGNKTKKKYTKISKALKRPKIKKLDEDIPDYEYSAFEDSFQDEQDYKQDDQNFVDIKEEKIEIKPKVSRARRPRPACPAQASYKCPTCSKEFRMKATYKAHMRFHTNYCVCESCGKRCRNNNQLQEHKRARHGLGRIHKCAYCEYSSATKEALTIHERRHTGERPYVCDHCGATFHRRSNLVQHIAIHLPEKNFQCDMCPKRLKSKKFLQIHKHNAHTGKRYGYLCPICEHRFEKPNKVRAHTRRVHGLPDDQQGPVVRVQLAPGPQRIS

Uniprot

H9JRL4 A0A0N1PI16 A0A212F9Y0 A0A1E1W0H9 A0A2H1W320 A0A0N1I3X2 + More
A0A2A4K576 A0A1E1WQF5 A0A212F2P5 A0A212F9X8 A0A212ENY9 A0A2A4K6V4 A0A212F2R2 H9JRL6 A0A0N1PHJ4 A0A2H1WX49 A0A2H1W4R9 A0A0R3P0M4 A0A3B0K262 A0A182JKR7

Pubmed

19121390 26354079 22118469 15632085 17994087

EMBL

BABH01031730 BABH01031731 BABH01031732 KQ459988 KPJ18791.1 AGBW02009549 + More
OWR50541.1 GDQN01010554 JAT80500.1 ODYU01006018 SOQ47495.1 KQ458863 KPJ04721.1 NWSH01000116 PCG79391.1 GDQN01002003 JAT89051.1 AGBW02010693 OWR48018.1 OWR50542.1 AGBW02013599 OWR43194.1 PCG79390.1 OWR48019.1 KPJ04720.1 ODYU01011730 SOQ57643.1 SOQ47494.1 CH379062 KRT05085.1 OUUW01000004 SPP80039.1

Proteomes

UP000005204 UP000053240 UP000007151 UP000053268 UP000218220 UP000001819 + More
UP000268350 UP000075880

PRIDE

H9JRL4 H9JRL6

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2
PF05605   zf-Di19

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type
IPR012934   Znf_AD
IPR008598   Di19_Zn_binding_dom

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9JRL4 A0A0N1PI16 A0A212F9Y0 A0A1E1W0H9 A0A2H1W320 A0A0N1I3X2 + More
A0A2A4K576 A0A1E1WQF5 A0A212F2P5 A0A212F9X8 A0A212ENY9 A0A2A4K6V4 A0A212F2R2 H9JRL6 A0A0N1PHJ4 A0A2H1WX49 A0A2H1W4R9 A0A0R3P0M4 A0A3B0K262 A0A182JKR7

PDB

2I13 E-value=1.32774e-15, Score=202

KEGG

101739585 no KO assigned | (RefSeq) zinc finger protein 808-like

GO

GO:0005634 GO:0003676 GO:0008270 GO:0003677 GO:0046872 GO:0016701 GO:0006355 GO:0003824 GO:0008152 GO:0016491 GO:0015930

Length:

384

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00247

outside

1 - 384

Pi

277.272463

Theta

202.451295

Tajima's D

2.044392

CLR

0.083612

CSRT

0.888055597220139

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics