HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	7.6	0.7	0.091	5.5	3	23	116	136
2	15.5	2.0	0.00027	0.016	1	23	240	262
3	18.2	0.2	3.9e-05	0.0023	1	23	268	291
4	13.8	3.8	0.00096	0.057	1	23	296	319
5	13.8	0.8	0.00095	0.057	2	23	474	495
6	15.5	2.8	0.00028	0.017	1	23	501	523

  Alignments for each domain:
  == domain 1  score: 7.6 bits;  conditional E-value: 0.091
                    ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                    C  C+ s++   +L +H+ tH
  KWMTBOMO14838 116 CALCNISYCELQMLDQHMTTH 136
                    999*****************9 PP

  == domain 2  score: 15.5 bits;  conditional E-value: 0.00027
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ykC  Cgk F+ ++ L+ H r+H
  KWMTBOMO14838 240 YKCFACGKQFTLSYYLRLHVRSH 262
                    9*********************9 PP

  == domain 3  score: 18.2 bits;  conditional E-value: 3.9e-05
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    y+C +Cg+sF + s L rH ++ H
  KWMTBOMO14838 268 YTCAECGQSFITASKLGRHNKRiH 291
                    9******************99988 PP

  == domain 4  score: 13.8 bits;  conditional E-value: 0.00096
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    y+C +C k F++ ++LkrH  + H
  KWMTBOMO14838 296 YQCRICYKFFSQFDLLKRHFDKkH 319
                    9******************88877 PP

  == domain 5  score: 13.8 bits;  conditional E-value: 0.00095
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C +C+k+ ++   +k+H+rtH
  KWMTBOMO14838 474 TCQICNKTISSVTYMKVHLRTH 495
                    8********************9 PP

  == domain 6  score: 15.5 bits;  conditional E-value: 0.00028
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC +C++ F ++s + rH  tH
  KWMTBOMO14838 501 FKCYICDRGFITSSKMHRHVLTH 523
                    8*********************9 PP