HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	8.2	2.4	0.057	3.4	1	19	41	59
2	13.9	1.1	0.00092	0.055	1	23	71	93
3	12.5	4.1	0.0025	0.15	1	23	106	128
4	22.0	1.9	2.3e-06	0.00014	1	23	135	157
5	18.5	1.6	3e-05	0.0018	3	23	165	185
6	19.9	2.4	1.2e-05	0.00069	1	23	191	213
7	19.1	0.4	2e-05	0.0012	1	23	219	242
8	15.1	3.0	0.00038	0.023	1	23	248	271

  Alignments for each domain:
  == domain 1  score: 8.2 bits;  conditional E-value: 0.057
                   EEETTTTEEESSHHHHHHH CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrH 19
                   +kC +C k++k++   ++H
  KWMTBOMO14753 41 FKCFGCEKKCKTWKTRQSH 59
                   8*************99999 PP

  == domain 2  score: 13.9 bits;  conditional E-value: 0.00092
                   EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                   +kC++C++  + +  +++Hir H
  KWMTBOMO14753 71 FKCSICNRYLPKRRTYEAHIRDH 93
                   8********************99 PP

  == domain 3  score: 12.5 bits;  conditional E-value: 0.0025
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC++C ++Fk+k +L+ H   H
  KWMTBOMO14753 106 FKCNKCLQCFKTKQSLTEHSEEH 128
                    8******************7776 PP

  == domain 4  score: 22.0 bits;  conditional E-value: 2.3e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C+ Cg++F+r++ L +H  tH
  KWMTBOMO14753 135 FVCDACGRVFSRQDYLHKHKLTH 157
                    89*******************99 PP

  == domain 5  score: 18.5 bits;  conditional E-value: 3e-05
                    ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                    Cp+C+ + +++s+L++Hir+H
  KWMTBOMO14753 165 CPHCDFKATQRSSLTVHIRKH 185
                    ********************9 PP

  == domain 6  score: 19.9 bits;  conditional E-value: 1.2e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y C++C++++ ++snL++H+r+H
  KWMTBOMO14753 191 YSCDVCPQRCISSSNLRAHRRRH 213
                    89********************9 PP

  == domain 7  score: 19.1 bits;  conditional E-value: 2e-05
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    ++Cp+C+k+F  k +L+ H ++ H
  KWMTBOMO14753 219 FECPICNKKFGYKTSLEEHVSSnH 242
                    89******************9988 PP

  == domain 8  score: 15.1 bits;  conditional E-value: 0.00038
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    ++C++C+ +++rk  L+rH+   H
  KWMTBOMO14753 248 HTCDHCSATYSRKRGLQRHLAAkH 271
                    79*****************98766 PP