Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO14662 | zf-C2H2 | 1.5e-08 | 8.2e-06 | 2 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 25.9 1.0 1.4e-07 8.2e-06 2 23 41 62 2 10.8 0.2 0.0088 0.53 1 13 68 80 Alignments for each domain: == domain 1 score: 25.9 bits; conditional E-value: 1.4e-07 EETTTTEEESSHHHHHHHHHCC CS zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23 +C+ C k+F ++++Lk+H rtH KWMTBOMO14662 41 PCDQCEKTFVTNYELKKHTRTH 62 6********************9 PP == domain 2 score: 10.8 bits; conditional E-value: 0.0088 EEETTTTEEESSH CS zf-C2H2 1 ykCpdCgksFkrk 13 y C+ Cgk++++ KWMTBOMO14662 68 YMCTTCGKTYTQL 80 89********986 PP |
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