HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	12.9	0.0	0.0019	0.11	1	23	761	784
2	7.0	0.4	0.14	8.5	3	23	811	832
3	8.4	1.4	0.049	2.9	1	23	855	877
4	18.3	1.3	3.5e-05	0.0021	1	23	881	903
5	10.2	4.2	0.014	0.82	1	23	908	931
6	11.6	1.6	0.0047	0.28	2	23	939	961
7	13.4	1.8	0.0012	0.075	1	23	967	990
8	15.7	2.8	0.00024	0.014	2	23	997	1018
9	23.8	0.2	6.2e-07	3.7e-05	1	23	1024	1046
10	13.9	5.3	0.00089	0.053	1	23	1052	1075

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.0019
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    + C +C   ++++ +L+rH r  H
  KWMTBOMO14573 761 FSCAYCEGAYPDPGELRRHTRAeH 784
                    89******************9888 PP

  == domain 2  score: 7.0 bits;  conditional E-value: 0.14
                    ETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirt.H 23 
                    C+ C k+  +   Lk H+ + H
  KWMTBOMO14573 811 CTLCEKTLDNLTTLKEHLTKtH 832
                    ******************9988 PP

  == domain 3  score: 8.4 bits;  conditional E-value: 0.049
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    + C +C  ++ +  +Lk+H+++H
  KWMTBOMO14573 855 FDCAKCASTYETFKMLKQHMNKH 877
                    78********************9 PP

  == domain 4  score: 18.3 bits;  conditional E-value: 3.5e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C++Cg  F +k +L +H+++H
  KWMTBOMO14573 881 YVCGKCGTAFATKRSLHSHRNVH 903
                    9********************99 PP

  == domain 5  score: 10.2 bits;  conditional E-value: 0.014
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    ykC++C+k+F+++   + H +  H
  KWMTBOMO14573 908 YKCGYCDKVFSNRPKKCYHEKLqH 931
                    9***********988888877766 PP

  == domain 6  score: 11.6 bits;  conditional E-value: 0.0047
                    EETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirt.H 23 
                    kC +Cg +Fk+ ++ ++H+ + H
  KWMTBOMO14573 939 KCQHCGAPFKSYYQRNQHLIRvH 961
                    8******************9999 PP

  == domain 7  score: 13.4 bits;  conditional E-value: 0.0012
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    ykC++C+ks+  ks+L+ Hi++ H
  KWMTBOMO14573 967 YKCNVCNKSYLLKSLLMYHIKRnH 990
                    9*********************99 PP

  == domain 8  score: 15.7 bits;  conditional E-value: 0.00024
                     EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2    2 kCpdCgksFkrksnLkrHirtH 23  
                     +C++Cg++F +k  Lk+H+ +H
  KWMTBOMO14573  997 QCTECGYRFFSKKALKAHMVRH 1018
                     8******************999 PP

  == domain 9  score: 23.8 bits;  conditional E-value: 6.2e-07
                     EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2    1 ykCpdCgksFkrksnLkrHirtH 23  
                     y C++Cgk + rk+ L+ H+r+H
  KWMTBOMO14573 1024 YACEVCGKAYARKYTLREHMRIH 1046
                     88********************9 PP

  == domain 10  score: 13.9 bits;  conditional E-value: 0.00089
                     EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2    1 ykCpdCgksFkrksnLkrHirt.H 23  
                     +kC++C+ +F +k +Lk+H+ + H
  KWMTBOMO14573 1052 FKCHVCSLTFVQKCSLKSHLLSnH 1075
                     8*******************9988 PP