HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	6.6	0.1	0.18	11	3	23	96	116
2	16.6	2.8	0.00012	0.0073	1	23	122	144
3	18.5	4.2	3e-05	0.0018	1	23	149	171
4	7.0	3.8	0.14	8.3	3	23	177	197

  Alignments for each domain:
  == domain 1  score: 6.6 bits;  conditional E-value: 0.18
                    ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                    C+ C+  +k+  +L++H   H
  KWMTBOMO14119  96 CNLCSAQYKNAQELRAHSLEH 116
                    *****************8877 PP

  == domain 2  score: 16.6 bits;  conditional E-value: 0.00012
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC++Cg+ Fk   +L+ H+++H
  KWMTBOMO14119 122 HKCDECGRYFKKAFSLRLHQKIH 144
                    79*******************99 PP

  == domain 3  score: 18.5 bits;  conditional E-value: 3e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    + C  C+++F++k +L rH+r+H
  KWMTBOMO14119 149 FDCRLCDMKFTSKGHLFRHLRSH 171
                    78********************9 PP

  == domain 4  score: 7.0 bits;  conditional E-value: 0.14
                    ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                    C++C+ ++ ++ +L+rH+r H
  KWMTBOMO14119 177 CDVCPAKYHSRIQLNRHRRLH 197
                    *******************99 PP