HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	26.4	0.1	9.5e-08	5.7e-06	1	23	274	298
2	20.2	4.3	9e-06	0.00054	1	23	304	326
3	17.7	0.3	5.4e-05	0.0032	1	23	332	354

  Alignments for each domain:
  == domain 1  score: 26.4 bits;  conditional E-value: 9.5e-08
                    EEET..TTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                    y Cp  +C+++F+r+++L+rHir+H
  KWMTBOMO13731 274 YACPvdGCDRRFSRSDELTRHIRIH 298
                    78**********************9 PP

  == domain 2  score: 20.2 bits;  conditional E-value: 9e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C +C +sF+r+++L++H rtH
  KWMTBOMO13731 304 FQCRICMRSFSRSDHLTTHVRTH 326
                    89********************9 PP

  == domain 3  score: 17.7 bits;  conditional E-value: 5.4e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    + C++Cg++F r+++ krH ++H
  KWMTBOMO13731 332 FACDVCGRKFARSDEKKRHAKVH 354
                    78*******************99 PP