HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	4.5	0.6	0.86	51	1	23	46	69
2	3.4	0.1	1.9	1.2e+02	1	21	107	127
3	9.6	0.2	0.02	1.2	1	23	255	277
4	13.2	0.7	0.0015	0.089	1	23	286	308
5	14.5	1.9	0.00057	0.034	1	23	314	337
6	11.6	1.5	0.0047	0.28	1	23	656	679
7	15.5	2.1	0.00028	0.017	2	23	871	892
8	8.2	5.6	0.056	3.4	1	23	898	921
9	9.0	1.3	0.031	1.9	1	23	954	978
10	8.0	0.1	0.068	4.1	1	23	1002	1025

  Alignments for each domain:
  == domain 1  score: 4.5 bits;  conditional E-value: 0.86
                   EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHirt.H 23
                   + Cp+C ++F +   +  H+ t H
  KWMTBOMO12021 46 FDCPKCRQRFDSVNAFDIHRFTaH 69
                   78*********9999999998888 PP

  == domain 2  score: 3.4 bits;  conditional E-value: 1.9
                    EEETTTTEEESSHHHHHHHHH CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHir 21 
                    ykC++C++  ++   ++ H++
  KWMTBOMO12021 107 YKCDVCSRDLPNIQVFEIHRK 127
                    9******99888887777776 PP

  == domain 3  score: 9.6 bits;  conditional E-value: 0.02
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C  C+ +F++   Lk H r+H
  KWMTBOMO12021 255 FPCRLCPAKFPNLRALKGHNRVH 277
                    89*******************99 PP

  == domain 4  score: 13.2 bits;  conditional E-value: 0.0015
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C+ C+    +k  L+rH+rtH
  KWMTBOMO12021 286 YQCNMCPHASLDKAALVRHMRTH 308
                    9******9999***********9 PP

  == domain 5  score: 14.5 bits;  conditional E-value: 0.00057
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    y+C +C++ F++k n +rH+r  H
  KWMTBOMO12021 314 YECAVCNYAFTTKANCERHLRNrH 337
                    99*******************999 PP

  == domain 6  score: 11.6 bits;  conditional E-value: 0.0047
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    + C+ C+ +F+ +sn++rH +  H
  KWMTBOMO12021 656 FSCSQCSARFTLRSNMERHVKQqH 679
                    89*****************99888 PP

  == domain 7  score: 15.5 bits;  conditional E-value: 0.00028
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                     Cp+C+++F+ +s+L+rH  tH
  KWMTBOMO12021 871 SCPYCHRKFPWSSSLRRHVLTH 892
                    5********************9 PP

  == domain 8  score: 8.2 bits;  conditional E-value: 0.056
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    +kCp+C+  F++ksn  rH+ + H
  KWMTBOMO12021 898 FKCPHCPLLFTTKSNCDRHLLRkH 921
                    8*******************9999 PP

  == domain 9  score: 9.0 bits;  conditional E-value: 0.031
                    EEETTTT.EEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCg.ksFkrksnLkrHirt.H 23 
                    +kC  C+  +F++ + Lk+H+++ H
  KWMTBOMO12021 954 FKCASCPtSTFSSIETLKKHMSSrH 978
                    89*****99*************999 PP

  == domain 10  score: 8.0 bits;  conditional E-value: 0.068
                     EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2    1 ykCpdCgksFkrksnLkrHirt.H 23  
                     +kC+ C  sF ++s   +H+   H
  KWMTBOMO12021 1002 FKCHLCEASFGDRSGALAHLAAtH 1025
                     8*************9999987666 PP