HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	6.3	0.1	0.24	14	3	16	196	206
2	12.8	0.9	0.002	0.12	1	23	219	241
3	14.2	0.1	0.00072	0.043	1	23	247	269
4	21.6	0.6	3.2e-06	0.00019	1	23	275	297
5	16.9	2.4	0.0001	0.0061	2	23	305	326
6	7.1	6.7	0.13	7.8	1	19	332	350

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.24
                    ETTTTEEESSHHHH CS
        zf-C2H2   3 CpdCgksFkrksnL 16 
                    Cp+Cgk  k+   L
  KWMTBOMO13187 196 CPYCGKITKS---L 206
                    9999998854...4 PP

  == domain 2  score: 12.8 bits;  conditional E-value: 0.002
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ykC++C+k F ++  L+ H ++H
  KWMTBOMO13187 219 YKCEICSKGFLSSGGLTYHKKKH 241
                    9*********************9 PP

  == domain 3  score: 14.2 bits;  conditional E-value: 0.00072
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC+ C   F +k+ L++H+ +H
  KWMTBOMO13187 247 FKCDQCIAAFVTKEALRNHMIKH 269
                    89*******************99 PP

  == domain 4  score: 21.6 bits;  conditional E-value: 3.2e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C+ C k Fkrk  LkrH  +H
  KWMTBOMO13187 275 FVCNTCEKGFKRKFALKRHVAIH 297
                    89*****************9998 PP

  == domain 5  score: 16.9 bits;  conditional E-value: 0.0001
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    kC+ C +sF ++  L++H+r+H
  KWMTBOMO13187 305 KCESCEMSFHTNAALNHHMRVH 326
                    8********************9 PP

  == domain 6  score: 7.1 bits;  conditional E-value: 0.13
                    EEETTTTEEESSHHHHHHH CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrH 19 
                    y C++C+++++ k++++rH
  KWMTBOMO13187 332 YNCEICTQPYSYKHDFNRH 350
                    89***************** PP