Silkworm Genome Informatics Database

Gene

KWMTBOMO13187

Pre Gene Modal

BGIBMGA000356

Annotation

PREDICTED:_zinc_finger_protein_729-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr22(+):9692227-9697844 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 3.895

CDS

ATGATTACATCAGTAGCAAACATACCGATTAACAAAAATGATCAGCTTCCAAATAAAATATGTCTTGATTGTCTGAGGCAGCTTCGCGAAGCATATAATTTCAAACTTTTTATAAAACACTCGCATGACTTATTAAATGAAAGAAATTTACTGAAAAGAATTTATTTTAGTGATCTCAATGATATCAAAGTACAAACTGGAATATTAGACGATAAAAGAAATGTACTTAATTCAATAACTTTAATTGACTTAATACAAACTAAAAACAATTGCATTTCATATAATGATATTCTAATCAGGAAACTTTGTCATGATGTTGAAAAGGACTTTGATGCATTGGATCAGAGAAATGAAGACAGTGGCGCTGAAGATTTCCACAGTGATACTGATATAGTAAATGAATCTGAGAAACCATTGAAATTAGAAAAACATAAGAAGGGAATTTTGAAGCATGAAAAAGGTATTGAAATTGAATATAAAATATGCAAGAAACCGATAAAGCCGAAAGTCTTAAAGAATGTCGTTCTGCTGCAAAGTGACCCAGATGTCGTTAAAAAACGATCTCATAAGATCCGGCAAGATATTTGTCCTTACTGTGGTAAAATAACTAAATCATTAAAAGCTCATGCACTAGTACATACAGGAGAAAAGAAATATAAATGTGAAATTTGTAGTAAAGGGTTTTTGTCTTCGGGAGGCTTAACATACCACAAGAAAAAACACACCGCCTCAAAGGATTTTAAATGTGATCAGTGCATAGCCGCCTTCGTCACTAAAGAAGCCTTGAGGAACCACATGATTAAACATGCACCCGAGAGAAAATTTGTTTGTAACACTTGCGAAAAAGGATTCAAAAGGAAATTTGCATTAAAACGTCACGTAGCAATACATAATTTCGGTAAGAAAAAAATCAAATGCGAGTCGTGCGAGATGTCGTTTCACACTAACGCCGCTTTGAATCATCACATGCGAGTGCACACCGGAGAGCGACCTTATAATTGTGAGATCTGCACGCAGCCCTACAGTTACAAGCACGATTTTAATCGGCACTGCTTTAAAAAGCACGGTGTCTTTTTAAAGCGGAGGCCAGTCTACGTCATGAACGAGGAAGTTTTGGCCCAAGAACGGATCATTATGAAAGACCTACTATTAAGGATCCAAGGAATCATCAAAGACGATAAACCACTTAATCCCTTTGAAGGTCCGCAAGCACATTTAGCTTTCGAACAAGCCGTAAAAGCACTGGAGTCTAATCAAATAGCCGTGGACTTGTAA

Protein

MITSVANIPINKNDQLPNKICLDCLRQLREAYNFKLFIKHSHDLLNERNLLKRIYFSDLNDIKVQTGILDDKRNVLNSITLIDLIQTKNNCISYNDILIRKLCHDVEKDFDALDQRNEDSGAEDFHSDTDIVNESEKPLKLEKHKKGILKHEKGIEIEYKICKKPIKPKVLKNVVLLQSDPDVVKKRSHKIRQDICPYCGKITKSLKAHALVHTGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCDQCIAAFVTKEALRNHMIKHAPERKFVCNTCEKGFKRKFALKRHVAIHNFGKKKIKCESCEMSFHTNAALNHHMRVHTGERPYNCEICTQPYSYKHDFNRHCFKKHGVFLKRRPVYVMNEEVLAQERIIMKDLLLRIQGIIKDDKPLNPFEGPQAHLAFEQAVKALESNQIAVDL

Uniprot

A0A2H1V6A2 A0A3S2LQ24 A0A1W4X773 A0A1W4WWE3 D6WKU4 A0A1Y1MJ55 + More
A0A194RKL6

Pubmed

18362917 19820115 28004739 26354079

EMBL

ODYU01000908 SOQ36380.1 RSAL01000618 RVE41302.1 KQ971343 EFA04018.2 + More
GEZM01030070 JAV85822.1 KQ460075 KPJ17964.1

Proteomes

UP000283053 UP000192223 UP000007266 UP000053240

Pfam

PF07776 zf-AD + More
PF00096 zf-C2H2

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR012934   Znf_AD
IPR013087   Znf_C2H2_type

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A2H1V6A2 A0A3S2LQ24 A0A1W4X773 A0A1W4WWE3 D6WKU4 A0A1Y1MJ55 + More
A0A194RKL6

PDB

2I13 E-value=1.07582e-24, Score=281

KEGG

101737411 no KO assigned | (RefSeq) zinc finger protein 729-like

GO

GO:0008270 GO:0005634 GO:0003676 GO:0046872 GO:0016887 GO:0005737 GO:0048869 GO:0016491 GO:0015930

Length:

424

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00432

outside

1 - 424

Pi

163.113419

Theta

206.671653

Tajima's D

-1.072049

CLR

139.580418

CSRT

0.124943752812359

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics