Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO13124 | zf-C2H2 | 5.3e-18 | 0.00015 | 5 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 18.2 2.2 3.9e-05 0.0023 1 23 621 643 2 21.0 4.3 5e-06 0.0003 1 23 649 671 3 21.9 4.0 2.5e-06 0.00015 1 23 677 699 4 7.1 2.9 0.13 7.7 1 23 705 727 5 15.7 0.1 0.00025 0.015 1 22 733 754 Alignments for each domain: == domain 1 score: 18.2 bits; conditional E-value: 3.9e-05 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y+C++C k+F + snLk+H+rtH KWMTBOMO13124 621 YECNVCCKTFGQLSNLKVHLRTH 643 99********************9 PP == domain 2 score: 21.0 bits; conditional E-value: 5e-06 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 +kC++C+ksF++ +L++H +H KWMTBOMO13124 649 FKCNVCNKSFTQLAHLQKHHLVH 671 8*******************999 PP == domain 3 score: 21.9 bits; conditional E-value: 2.5e-06 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 ++C++C+k+F++ snLk+H+r H KWMTBOMO13124 677 HQCDICKKRFSSTSNLKTHLRLH 699 79********************9 PP == domain 4 score: 7.1 bits; conditional E-value: 0.13 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y C+ C ++F++ +Lk H r H KWMTBOMO13124 705 YACDLCMQKFTQFVHLKLHKRLH 727 78*******************99 PP == domain 5 score: 15.7 bits; conditional E-value: 0.00025 EEETTTTEEESSHHHHHHHHHC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirt 22 y+C +C+k++ + s L++H +t KWMTBOMO13124 733 YVCQGCDKKYISASGLRTHWKT 754 9******************875 PP |
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