渝公网安备 50010602502065号
| Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
|---|---|---|---|---|---|
| KWMTBOMO01119 | zf-C2H2 | 6.4e-28 | 0.0013 | 17 | + View |
HMM length of domain: 23 aa
c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified.
Domain annotation for each sequence:
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to
-- ----- ---- -------- -------- ------- ------ ------- ------
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 6.9 7.5 0.15 9.2 1 21 362 382
2 5.8 1.6 0.32 19 2 23 392 414
3 4.6 3.1 0.83 50 1 23 418 440
4 1.7 0.3 6.5 3.9e+02 1 14 460 473
5 12.6 0.5 0.0023 0.14 2 23 539 561
6 2.3 1.7 4.4 2.6e+02 3 22 577 596
7 7.6 0.2 0.093 5.5 3 23 613 633
8 18.9 0.4 2.2e-05 0.0013 2 23 639 660
9 16.5 0.9 0.00014 0.0082 1 20 666 685
10 16.5 0.9 0.00014 0.0082 1 20 707 726
11 16.5 0.9 0.00014 0.0082 1 20 748 767
12 16.5 0.9 0.00013 0.0079 1 20 789 808
13 16.5 0.9 0.00014 0.0082 1 20 830 849
14 16.5 0.9 0.00013 0.0079 1 20 871 890
15 16.5 0.9 0.00014 0.0082 1 20 912 931
16 18.9 2.2 2.2e-05 0.0013 1 23 953 975
17 17.7 1.8 5.5e-05 0.0033 1 23 981 1004
Alignments for each domain:
== domain 1 score: 6.9 bits; conditional E-value: 0.15
EEETTTTEEESSHHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHir 21
y+C+ C+k F++ +k+H r
KWMTBOMO01119 362 YQCETCTKQFTHMKTYKVHTR 382
9******************98 PP
== domain 2 score: 5.8 bits; conditional E-value: 0.32
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
+Cp+C+ +Fk+ + +H+r H
KWMTBOMO01119 392 ECPVCKLRFKSEASADSHRRHtH 414
5******************9988 PP
== domain 3 score: 4.6 bits; conditional E-value: 0.83
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
+ C+ C k F++ k+H+ H
KWMTBOMO01119 418 FHCKSCFKAFSNVATAKKHQLFH 440
78*****************9877 PP
== domain 4 score: 1.7 bits; conditional E-value: 6.5
EEETTTTEEESSHH CS
zf-C2H2 1 ykCpdCgksFkrks 14
y+C+ Cg + ++
KWMTBOMO01119 460 YTCTRCGIACGHRQ 473
9******8876665 PP
== domain 5 score: 12.6 bits; conditional E-value: 0.0023
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
+C+ Cg F ++s+L+ H + H
KWMTBOMO01119 539 TCKRCGTEFGTRSELNLHVKAqH 561
7*****************99877 PP
== domain 6 score: 2.3 bits; conditional E-value: 4.4
ETTTTEEESSHHHHHHHHHC CS
zf-C2H2 3 CpdCgksFkrksnLkrHirt 22
C++Cgk +++ + H +
KWMTBOMO01119 577 CEHCGKAVNSRREHWWHTFK 596
******99998776666655 PP
== domain 7 score: 7.6 bits; conditional E-value: 0.093
ETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23
C+ Cgk F +k L+ H +H
KWMTBOMO01119 613 CDTCGKGFQNKTILRIHELRH 633
*****************9998 PP
== domain 8 score: 18.9 bits; conditional E-value: 2.2e-05
EETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23
+C++Cg+ F +k+ L rH tH
KWMTBOMO01119 639 RCDECGRAFYDKYALARHAHTH 660
7******************999 PP
== domain 9 score: 16.5 bits; conditional E-value: 0.00014
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20
++C++Cg++F+ + nL+rH
KWMTBOMO01119 666 FVCTHCGQTFTLRTNLNRHA 685
89*****************6 PP
== domain 10 score: 16.5 bits; conditional E-value: 0.00014
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20
++C++Cg++F+ + nL+rH
KWMTBOMO01119 707 FVCTHCGQTFTLRTNLNRHA 726
89*****************6 PP
== domain 11 score: 16.5 bits; conditional E-value: 0.00014
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20
++C++Cg++F+ + nL+rH
KWMTBOMO01119 748 FVCTHCGQTFTLRTNLNRHA 767
89*****************6 PP
== domain 12 score: 16.5 bits; conditional E-value: 0.00013
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20
++C++Cg++F+ + nL+rH
KWMTBOMO01119 789 FVCTHCGQTFTLRTNLNRHA 808
89*****************6 PP
== domain 13 score: 16.5 bits; conditional E-value: 0.00014
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20
++C++Cg++F+ + nL+rH
KWMTBOMO01119 830 FVCTHCGQTFTLRTNLNRHA 849
89*****************6 PP
== domain 14 score: 16.5 bits; conditional E-value: 0.00013
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20
++C++Cg++F+ + nL+rH
KWMTBOMO01119 871 FVCTHCGQTFTLRTNLNRHA 890
89*****************6 PP
== domain 15 score: 16.5 bits; conditional E-value: 0.00014
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20
++C++Cg++F+ + nL+rH
KWMTBOMO01119 912 FVCTHCGQTFTLRTNLNRHA 931
89*****************6 PP
== domain 16 score: 18.9 bits; conditional E-value: 2.2e-05
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
++C++Cg++F+ + nL+rH ++H
KWMTBOMO01119 953 FVCTHCGQTFTLRTNLNRHAKVH 975
89*******************99 PP
== domain 17 score: 17.7 bits; conditional E-value: 5.5e-05
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y+C+ Cgk+Fk + + + Hirt H
KWMTBOMO01119 981 YECSMCGKKFKYSTSRNLHIRTvH 1004
99********************99 PP
|
|||||
渝公网安备 50010602502065号