渝公网安备 50010602502065号
| Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
|---|---|---|---|---|---|
| KWMTBOMO14585 | zf-C2H2 | 5.7e-39 | 0.00092 | 20 | + View |
HMM length of domain: 23 aa
c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified.
Domain annotation for each sequence:
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to
-- ----- ---- -------- -------- ------- ------ ------- ------
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 8.6 2.0 0.044 2.6 1 23 316 339
2 13.6 0.5 0.0011 0.068 2 23 410 431
3 11.1 0.4 0.0069 0.41 1 23 435 457
4 13.3 0.4 0.0014 0.084 1 23 464 487
5 9.6 1.3 0.021 1.2 2 23 495 517
6 9.1 1.0 0.029 1.8 1 23 524 547
7 15.2 2.5 0.00035 0.021 1 23 553 575
8 18.2 2.7 3.7e-05 0.0022 1 23 581 603
9 8.2 0.3 0.056 3.4 1 19 609 627
10 7.9 1.2 0.074 4.4 1 23 669 693
11 2.2 1.8 4.6 2.8e+02 3 23 766 786
12 17.2 0.1 8.2e-05 0.0049 1 23 790 812
13 5.3 0.3 0.5 30 1 23 827 850
14 7.1 0.3 0.13 7.7 3 23 859 880
15 17.6 1.1 6e-05 0.0036 1 23 885 908
16 5.5 0.0 0.42 25 1 16 914 929
17 10.4 0.7 0.012 0.7 1 23 1265 1289
18 9.4 0.2 0.025 1.5 2 23 1343 1365
19 19.5 0.5 1.5e-05 0.00092 1 23 1370 1393
20 13.7 1.1 0.001 0.061 1 23 1399 1421
Alignments for each domain:
== domain 1 score: 8.6 bits; conditional E-value: 0.044
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y C C+++F ++ +Lk+H H
KWMTBOMO14585 316 YSCCFCTERFQTPALLKQHNLNiH 339
89*****************76666 PP
== domain 2 score: 13.6 bits; conditional E-value: 0.0011
EETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23
+C +C+k+Fk +L H++ H
KWMTBOMO14585 410 ECAICKKRFKYFKLLAEHMNDH 431
6******************998 PP
== domain 3 score: 11.1 bits; conditional E-value: 0.0069
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y+C++Cg+ F +k ++ H +H
KWMTBOMO14585 435 YECSVCGRGFVNKQAMQLHSYRH 457
99*****************8887 PP
== domain 4 score: 13.3 bits; conditional E-value: 0.0014
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
+kCpdC+k+F ++ +H r H
KWMTBOMO14585 464 FKCPDCPKVFDTRPRRSAHVRLvH 487
8************99999999888 PP
== domain 5 score: 9.6 bits; conditional E-value: 0.021
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
+C+ C ++F + + ++H+ + H
KWMTBOMO14585 495 RCHLCEEKFVSAQQVQNHMVKtH 517
7******************9988 PP
== domain 6 score: 9.1 bits; conditional E-value: 0.029
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
+kC+ C+++++ +L H ++ H
KWMTBOMO14585 524 FKCDACDRTYTVARSLDEHKKRyH 547
8********************999 PP
== domain 7 score: 15.2 bits; conditional E-value: 0.00035
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
++C+ C +sF +k +L++H+ tH
KWMTBOMO14585 553 HQCTLCEMSFYSKMELNSHMVTH 575
79*******************99 PP
== domain 8 score: 18.2 bits; conditional E-value: 3.7e-05
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
++C+ C+k+F +k +L++H+r H
KWMTBOMO14585 581 FQCELCDKRFGTKCSLNQHMRAH 603
89*******************99 PP
== domain 9 score: 8.2 bits; conditional E-value: 0.056
EEETTTTEEESSHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrH 19
ykC+ C+ +F k L++H
KWMTBOMO14585 609 YKCDRCDVKFAAKNKLRAH 627
9*****************9 PP
== domain 10 score: 7.9 bits; conditional E-value: 0.074
EEETTTT.EEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCg.ksFkrksnLkrHirt.H 23
y C +C+ F ++L++H rt H
KWMTBOMO14585 669 YSCAYCTeVYFHAADDLRNHTRTnH 693
89*****8889999*********99 PP
== domain 11 score: 2.2 bits; conditional E-value: 4.6
ETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23
C C++ F++ +L H+++H
KWMTBOMO14585 766 CVLCKQHFTNYIQLDFHMNSH 786
99************9999999 PP
== domain 12 score: 17.2 bits; conditional E-value: 8.2e-05
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y+C+dCg++F + Lk+H + H
KWMTBOMO14585 790 YVCDDCGQTFISAARLKNHAKNH 812
9*******************999 PP
== domain 13 score: 5.3 bits; conditional E-value: 0.5
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
ykC +C+++ ++ + k Hi H
KWMTBOMO14585 827 YKCYYCPEKLPSERERKEHIEAnH 850
9************99999997666 PP
== domain 14 score: 7.1 bits; conditional E-value: 0.13
ETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 3 CpdCgksFkrksnLkrHirt.H 23
C+ Cgk F+ + + H+r+ H
KWMTBOMO14585 859 CDMCGKIFNWRQYYIEHLRKvH 880
9******************999 PP
== domain 15 score: 17.6 bits; conditional E-value: 6e-05
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y+C+ C+k+F+++ +L+rH + H
KWMTBOMO14585 885 YECTACDKKFSQNRDLRRHVESrH 908
99*****************98888 PP
== domain 16 score: 5.5 bits; conditional E-value: 0.42
EEETTTTEEESSHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnL 16
++Cp C +++++k L
KWMTBOMO14585 914 HVCPMCERRYSSKAAL 929
79*********99876 PP
== domain 17 score: 10.4 bits; conditional E-value: 0.012
EEETTTT.EEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCg.ksFkrksnLkrHirt.H 23
y C +C+ F + ++L++H rt H
KWMTBOMO14585 1265 YSCAYCTeVYFQTADDLRNHTRTnH 1289
89*****999*************99 PP
== domain 18 score: 9.4 bits; conditional E-value: 0.025
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
C+ Cgk F+ + + +H+r+ H
KWMTBOMO14585 1343 SCDMCGKIFNWRQYYIAHLRKvH 1365
6*******************999 PP
== domain 19 score: 19.5 bits; conditional E-value: 1.5e-05
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y+C++C+k+F+++ +L rH + H
KWMTBOMO14585 1370 YECTVCDKKFSQNGDLSRHVESrH 1393
99*****************98888 PP
== domain 20 score: 13.7 bits; conditional E-value: 0.001
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
++Cp C +++++k L++H ++H
KWMTBOMO14585 1399 HVCPMCERRYSSKAALVTHFKIH 1421
79******************999 PP
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渝公网安备 50010602502065号