Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO12619 | zf-C2H2 | 6.7e-15 | 6e-05 | 3 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 15.9 0.8 0.00021 0.013 1 23 159 183 2 23.2 0.3 1e-06 6e-05 1 23 189 213 3 23.2 1.1 1e-06 6.2e-05 1 23 219 241 Alignments for each domain: == domain 1 score: 15.9 bits; conditional E-value: 0.00021 EEET..TTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCp..dCgksFkrksnLkrHirtH 23 ++Cp +C+k + s+ ++H+r+H KWMTBOMO12619 159 FRCPveECSKLYAKASHVRAHLRRH 183 89**********************9 PP == domain 2 score: 23.2 bits; conditional E-value: 1e-06 EEET..TTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCp..dCgksFkrksnLkrHirtH 23 y+C+ dC+++F r+++L rH+r+H KWMTBOMO12619 189 YRCTwgDCSWRFARSDELARHRRSH 213 9***********************9 PP == domain 3 score: 23.2 bits; conditional E-value: 1e-06 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y+C +C k+F r+++L +H r+H KWMTBOMO12619 219 YRCVECEKRFARSDHLAKHGRVH 241 9********************99 PP |
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