HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	32.6	0.3	1e-09	6.1e-08	2	23	82	103
2	23.3	2.2	9.2e-07	5.5e-05	1	23	109	131
3	20.4	6.1	7.7e-06	0.00046	1	23	137	159

  Alignments for each domain:
  == domain 1  score: 32.6 bits;  conditional E-value: 1e-09
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C++Cgk F r+s+LkrH+rtH
  KWMTBOMO07092  82 PCEVCGKAFDRPSLLKRHMRTH 103
                    6********************9 PP

  == domain 2  score: 23.3 bits;  conditional E-value: 9.2e-07
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C +C+k F+++s+L++H+r+H
  KWMTBOMO07092 109 HVCMVCNKGFSTSSSLNTHRRIH 131
                    79********************9 PP

  == domain 3  score: 20.4 bits;  conditional E-value: 7.7e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C +Cgk+F+ +snL  H++tH
  KWMTBOMO07092 137 HQCQHCGKRFTASSNLYYHRMTH 159
                    79********************9 PP