HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	11.4	4.3	0.0055	0.33	3	23	474	495
2	8.5	3.1	0.047	2.8	3	23	514	534
3	4.4	2.0	0.92	55	1	23	541	563
4	20.1	0.4	9.5e-06	0.00057	1	23	576	598
5	26.6	0.8	8.2e-08	4.9e-06	2	23	605	626
6	22.2	1.7	2e-06	0.00012	1	23	632	654
7	10.3	1.5	0.012	0.73	1	21	659	679

  Alignments for each domain:
  == domain 1  score: 11.4 bits;  conditional E-value: 0.0055
                    ETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirt.H 23 
                    C++C+k+Fk+   L+ H r+ H
  KWMTBOMO10839 474 CKECKKKFKDMKALRIHSRKiH 495
                    *******************999 PP

  == domain 2  score: 8.5 bits;  conditional E-value: 0.047
                    ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                    C++Cgk F++   ++rH + H
  KWMTBOMO10839 514 CDKCGKEFNDMARFCRHKKQH 534
                    ******************998 PP

  == domain 3  score: 4.4 bits;  conditional E-value: 0.92
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C+ C  +F+++     H+ tH
  KWMTBOMO10839 541 YRCDQCMLTFTSQRTKDMHMVTH 563
                    9******************9999 PP

  == domain 4  score: 20.1 bits;  conditional E-value: 9.5e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C++Cg + ++ snL+ H+++H
  KWMTBOMO10839 576 YVCNICGVTINSYSNLRLHMKRH 598
                    9*********************9 PP

  == domain 5  score: 26.6 bits;  conditional E-value: 8.2e-08
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    kC+dCgk F r+++L+ H+rtH
  KWMTBOMO10839 605 KCEDCGKGFFRRYDLTIHMRTH 626
                    8********************9 PP

  == domain 6  score: 22.2 bits;  conditional E-value: 2e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC+ C +sF+r+  L +Hi+tH
  KWMTBOMO10839 632 FKCGFCERSFSRRTTLISHIQTH 654
                    8*********************9 PP

  == domain 7  score: 10.3 bits;  conditional E-value: 0.012
                    EEETTTTEEESSHHHHHHHHH CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHir 21 
                    y+C++C+ +F  k   +rH++
  KWMTBOMO10839 659 YVCDYCHTKFAMKRYIVRHLM 679
                    9******************97 PP