HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	16.3	2.9	0.00016	0.0093	1	23	499	521
2	23.0	1.2	1.2e-06	7.1e-05	1	23	527	549
3	23.6	3.0	7.4e-07	4.4e-05	2	23	767	788
4	18.8	3.4	2.6e-05	0.0015	1	23	794	816
5	19.6	0.7	1.4e-05	0.00082	1	22	824	845

  Alignments for each domain:
  == domain 1  score: 16.3 bits;  conditional E-value: 0.00016
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    + C+ Cgk+F+   nL +H+r+H
  KWMTBOMO10837 499 HSCEFCGKKFRFENNLIVHRRSH 521
                    68********************9 PP

  == domain 2  score: 23.0 bits;  conditional E-value: 1.2e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC++C+++F   s Lk+H+++H
  KWMTBOMO10837 527 FKCSECDETFEKASKLKKHMKVH 549
                    8********************99 PP

  == domain 3  score: 23.6 bits;  conditional E-value: 7.4e-07
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C+ Cgk+Fk+ snL++H+r+H
  KWMTBOMO10837 767 TCEFCGKVFKNCSNLTVHRRSH 788
                    7********************9 PP

  == domain 4  score: 18.8 bits;  conditional E-value: 2.6e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ykC+ C++ + ++s L+rH++tH
  KWMTBOMO10837 794 YKCELCSYACAQSSKLTRHMKTH 816
                    9*********************9 PP

  == domain 5  score: 19.6 bits;  conditional E-value: 1.4e-05
                    EEETTTTEEESSHHHHHHHHHC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt 22 
                    y+C  C ++F+ +s L++H+r+
  KWMTBOMO10837 824 YRCRFCEMPFSVPSTLEKHMRK 845
                    9*******************96 PP