| Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
|---|---|---|---|---|---|
| KWMTBOMO10592 | zf-C2H2 | 5.4e-19 | 0.00029 | 7 | + View |
HMM length of domain: 23 aa
c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified.
Domain annotation for each sequence:
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to
-- ----- ---- -------- -------- ------- ------ ------- ------
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 5.0 0.1 0.61 37 1 18 84 101
2 7.7 0.1 0.085 5.1 2 20 148 166
3 9.0 0.1 0.033 2 1 23 177 199
4 10.0 1.6 0.016 0.96 2 23 206 227
5 19.1 1.4 2.1e-05 0.0012 1 23 233 255
6 19.5 1.5 1.5e-05 0.0009 1 23 260 283
7 21.0 3.5 4.9e-06 0.00029 1 23 289 312
Alignments for each domain:
== domain 1 score: 5.0 bits; conditional E-value: 0.61
EEETTTTEEESSHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkr 18
+ C+ C k F + ++Lk+
KWMTBOMO10592 84 HICSNCEKIFHDMEELKK 101
67********99999875 PP
== domain 2 score: 7.7 bits; conditional E-value: 0.085
EETTTTEEESSHHHHHHHH CS
zf-C2H2 2 kCpdCgksFkrksnLkrHi 20
+C+ C + F + +L +H
KWMTBOMO10592 148 TCKRCARNFENENDLAVHE 166
8*****************6 PP
== domain 3 score: 9.0 bits; conditional E-value: 0.033
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y+C++Cg k+ L+rH+++H
KWMTBOMO10592 177 YVCEICGVEMKSMARLNRHRSIH 199
99******************999 PP
== domain 4 score: 10.0 bits; conditional E-value: 0.016
EETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23
C C+++ ++ + L++H rtH
KWMTBOMO10592 206 ACASCSYRGRTLYALRTHERTH 227
6999*****************9 PP
== domain 5 score: 19.1 bits; conditional E-value: 2.1e-05
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
+ Cp C ++F++ nL +H+r+H
KWMTBOMO10592 233 HACPRCARTFRSAANLASHRRRH 255
56********************9 PP
== domain 6 score: 19.5 bits; conditional E-value: 1.5e-05
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y Cp C+k+F+ k++L++H+ H
KWMTBOMO10592 260 YHCPTCTKPFRFKESLQNHLAAlH 283
89*****************98766 PP
== domain 7 score: 21.0 bits; conditional E-value: 4.9e-06
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
++C+ Cgk F ++ +L+rH r+ H
KWMTBOMO10592 289 HVCNTCGKAFATRKLLCRHERRvH 312
79********************99 PP
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