Silkworm Genome Informatics Database

Gene

KWMTBOMO10783

Pre Gene Modal

BGIBMGA008390

Annotation

PREDICTED:_helix-loop-helix_protein_delilah-like_[Amyelois_transitella]

Location

Bomo_Chr18(-):2911602-2912307 View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear Reliability : 2.718

CDS

ATGCCCGAGCACGACAAGTACCAGCTGCGGCCGCGGGCTGCGAGGAGCCGCGAGCCTCGCGCCCGACGAACTCCTCAACCCCTCAGTAAATACCGGAGGAAAACAGCGAACGCAAGGGAACGAAGCCGAATGAGGGAAATCAACCGAGCCTTTGAAGCTTTAAGACGCGCTGTACCCGCTTCCGAGATCACGGGAACGCCGGTTCCGTGCGAGAAGCTCACCAAGATCACTACTCTGCGACTGGCTATGAGATACATCACGGCTCTGTCTGCAGCCTTGAGGGACGACGGCCCTGAGACGGAATCAACTCGGCCGGATCGATGGCCTTCGCCTCTTTGCTCGGATCTGTCGGAGTTCTCGACGGAACTGGACCAGGAGACTCCCTCCGAGTTCGCGGAGGACTCGTTGTCTCCATTCGATTCGTTCTTTGCGGAGTTCGACTGTGATTACATCGAAAGGACATTTGCGTGA

Protein

MPEHDKYQLRPRAARSREPRARRTPQPLSKYRRKTANARERSRMREINRAFEALRRAVPASEITGTPVPCEKLTKITTLRLAMRYITALSAALRDDGPETESTRPDRWPSPLCSDLSEFSTELDQETPSEFAEDSLSPFDSFFAEFDCDYIERTFA

Uniprot

H9JFU3 A0A2H1W3W9 A0A212FC27 A0A2A4J565 A0A0L7L5V7 A0A0N0PCU1 + More
A0A194PD43 S4PML0 A0A212FC36 D2A2Z8 A0A1Y1LQM0 A0A1W4W6V8 D2A305 A0A0F7DCF6 A0A1W4W6M8 U4UQY7 N6UQ36 A0A1S3DNX6 N6TWP8

Pubmed

19121390 22118469 26227816 26354079 23622113 18362917 + More
19820115 28004739 23537049

EMBL

BABH01001602 ODYU01006164 SOQ47781.1 AGBW02009236 OWR51296.1 NWSH01003334 + More
PCG66532.1 JTDY01002746 KOB70800.1 KQ460556 KPJ14002.1 KQ459606 KPI90928.1 GAIX01000121 JAA92439.1 OWR51295.1 KQ971338 EFA01977.1 GEZM01052115 JAV74600.1 EFA01973.1 KP147932 AKG92769.1 KB632431 ERL95522.1 APGK01021610 KB740346 ENN80852.1 APGK01049213 KB741144 KB632308 ENN73710.1 ERL91918.1

Proteomes

UP000005204 UP000007151 UP000218220 UP000037510 UP000053240 UP000053268 + More
UP000007266 UP000192223 UP000030742 UP000019118 UP000079169

PRIDE

H9JFU3

Pfam

PF00010 HLH

Interpro

IPR011598 bHLH_dom + More
IPR036638 HLH_DNA-bd_sf

SUPFAM

SSF47459 SSF47459

Gene 3D

4.10.280.10

CDD

cd00083 HLH

ProteinModelPortal

H9JFU3 A0A2H1W3W9 A0A212FC27 A0A2A4J565 A0A0L7L5V7 A0A0N0PCU1 + More
A0A194PD43 S4PML0 A0A212FC36 D2A2Z8 A0A1Y1LQM0 A0A1W4W6V8 D2A305 A0A0F7DCF6 A0A1W4W6M8 U4UQY7 N6UQ36 A0A1S3DNX6 N6TWP8

PDB

2QL2 E-value=6.37639e-08, Score=130

KEGG

101746853 K09104 delilah | (RefSeq) helix-loop-helix protein delilah-like

GO

GO:0046983 GO:0016773 GO:0030234 GO:0042176 GO:0005785 GO:0006886 GO:0006810 GO:0016614 GO:0005506 GO:0003824

Length:

156

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00088

Exp number, first 60 AAs:

0

Total prob of N-in:

0.23404

outside

1 - 156

Pi

121.719147

Theta

123.312548

Tajima's D

-0.127279

CLR

71.472462

CSRT

0.334333283335833

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics