HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	15.7	5.6	0.00024	0.015	1	23	155	177
2	1.4	0.0	8.5	5.1e+02	2	7	184	189
3	22.4	1.3	1.8e-06	0.00011	1	23	208	232
4	22.7	3.9	1.4e-06	8.6e-05	1	23	238	260
5	9.3	0.7	0.027	1.6	1	20	266	284
6	8.6	3.7	0.043	2.6	3	23	307	328

  Alignments for each domain:
  == domain 1  score: 15.7 bits;  conditional E-value: 0.00024
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C  C+k+F+rk n+  H ++H
  KWMTBOMO10677 155 HTCQFCSKVFTRKFNFLLHVKRH 177
                    79********************9 PP

  == domain 2  score: 1.4 bits;  conditional E-value: 8.5
                    EETTTT CS
        zf-C2H2   2 kCpdCg 7  
                    +Cp+Cg
  KWMTBOMO10677 184 TCPGCG 189
                    8****9 PP

  == domain 3  score: 22.4 bits;  conditional E-value: 1.8e-06
                    EEET..TTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                    + C+  +Cgk+F++k nL+ H rtH
  KWMTBOMO10677 208 HMCSvlGCGKMFTTKTNLNIHVRTH 232
                    579999******************9 PP

  == domain 4  score: 22.7 bits;  conditional E-value: 1.4e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C++C+k+F++k  Lk Hir+H
  KWMTBOMO10677 238 FECSHCKKTFTSKNTLKDHIRIH 260
                    89********************9 PP

  == domain 5  score: 9.3 bits;  conditional E-value: 0.027
                    EEETTTTEEESSHHHHHHHH CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHi 20 
                    y Cp+Cg+ F     L +H+
  KWMTBOMO10677 266 YMCPVCGQQF-ATNKLSSHM 284
                    89********.777777777 PP

  == domain 6  score: 8.6 bits;  conditional E-value: 0.043
                    ETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirt.H 23 
                    C +Cg ++ ++ +L++H ++ H
  KWMTBOMO10677 307 CLYCGAKYHHRQSLNKHVKKqH 328
                    99*****************999 PP