Gene

KWMTBOMO10681

Pre Gene Modal

BGIBMGA008250

Annotation

PREDICTED:_gastrula_zinc_finger_protein_XlCGF57.1-like_[Amyelois_transitella]

Location

Bomo_Chr18(-):426306-428169      View in EpiBrowser

Full name

Zinc finger protein      

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.694

CDS

ATGGAGTCCAAAATATGTCGTTTATGTCTCGTTCAACCAGGAAATATTAATTTGTTCGAAACACACGAAGATAATGTGCAATATTGTAAGAAAATTATGCATTGTGCGAACATCCACATCGCAGAGGACGACGGCCTGCCTGATTTCATGTGCGAAGAATGCCTAGTTAAACTTTCTGTTGCCTTCGATTTCATCACCAAATGCCAAGCCTCTGACAAAGCTTTACGTTCAGTATCTTTGAATTATAAACCAGAAAAGAACGACGTCAAATCCGAATACATTGAAATTAAAGAGGAACCTGAAATCAAGTCTGAAACTGAATTCTTAGACGGTGATGATCATCAGTATGAAGATTTACAAGGTAAACCCAGAAAATCATCTAGAACAAAGAGTAGGGGGCCAAGAATCTGTGCAATATGCGGTTACAGGGCTGCCTGTCAGAGTGCCTACAAAGACCATATGAGATCTCATTCTAAAATCAAATTGTTTGAATGTGAAATTTGTCACAAACATTTGTCTGGTAAATATACTCTCAGAAAGCACAAGGAATCGCGCCACGGCATGGAAGTAGTTAGAAAGTTCAAAAAAGAGGCCAGAAATAAAACAATTAATGGTCCAGTACAATGTGTTGTCTGCGGGCAGATACTACCTTCTTCTTCAGCCTTAGAAATTCATAACACAATTCATACAGGAGAGAAACCATATCAATGTGATGTCTGCAATAGATCATTCCGATTAAAGGGTTGTTTGAAAAGGCACATTGAAACTAACCACTTAGAGAGAGAAAAAACATTTATTTGTGAGACATGCGGCAACAGTTTCTACAGGAAAGCAGATATCATAATTCACATTCGTTCTCACACGCAAGAGAAGCCATATGAATGTAAATTATGCCACAGCAAATTCTCCCAACTTTCATCTCTGATACGCCACAAACGAACACATTCTGGAGAGAAAACACATTCCTGCTCAACATGCAACAAACAATTTTATGACAAATATGCTGTGAGGAGACACATGCTGTCACATTCCGATGAGAGGAAACACAAGTGTCACCTTTGTGACAAACTTTTCAAGACGAAATCAGCAAGGAATTTACATCTTTCATTACATACCAATGAGACTCGTTTCATATGCAGCTTCTGTGGAATGATGTTTTCACTTAAAGGTAATCTCAAGACCCATATGATTAGGAAACATTCGGAAAAAGCCGGAGAATGTAAAGTATGTATGAAAGAATTTCCGAATCTAGCTGAACATTTACGCAAACATACCGGAGAAAAACCCTATGTTTGCAGGACCTGCAATCAAGCATTTGCTACACAAAGAAGTCTTTCTTTCCACACCATGTACAAACATGAGAGAGCTGATAAATATCGTTGTACAGTTGGAGAATGTAATAAAGCATTTCCCATGATGAAGTTGCTCGAGACTCATTTGTATAAATATCATACAGACACCATGCCGTTTATGTGCAGTCACTGTCCAAGAAGGTTTTATCGTAGGTCAGATTTGACAAGACACCTTAAAGGTAGTCATTTAGACAGTGACAAACTCAAAGTAAAACCAGAGCTAATATTAACTATAGTGAATATCTAA

Protein

MESKICRLCLVQPGNINLFETHEDNVQYCKKIMHCANIHIAEDDGLPDFMCEECLVKLSVAFDFITKCQASDKALRSVSLNYKPEKNDVKSEYIEIKEEPEIKSETEFLDGDDHQYEDLQGKPRKSSRTKSRGPRICAICGYRAACQSAYKDHMRSHSKIKLFECEICHKHLSGKYTLRKHKESRHGMEVVRKFKKEARNKTINGPVQCVVCGQILPSSSALEIHNTIHTGEKPYQCDVCNRSFRLKGCLKRHIETNHLEREKTFICETCGNSFYRKADIIIHIRSHTQEKPYECKLCHSKFSQLSSLIRHKRTHSGEKTHSCSTCNKQFYDKYAVRRHMLSHSDERKHKCHLCDKLFKTKSARNLHLSLHTNETRFICSFCGMMFSLKGNLKTHMIRKHSEKAGECKVCMKEFPNLAEHLRKHTGEKPYVCRTCNQAFATQRSLSFHTMYKHERADKYRCTVGECNKAFPMMKLLETHLYKYHTDTMPFMCSHCPRRFYRRSDLTRHLKGSHLDSDKLKVKPELILTIVNI

Uniprot

H9JFF3   A0A2W1BAG8   A0A0L7LJU2   A0A0L7LK64   H9JFG8   A0A3B3C4I9   + More
A0A3Q3FED3   A0A146XCF7   A0A147AF84   A0A3Q2Z8V3   A0A146P0B7   A0A3Q4AR89   J9JMS6   A0A146TB62   A0A146QI62   A0A3B3Z3J6   A0A146PSZ5   A0A3B3W1H6   A0A087U2Y4   A0A3Q2CMN1   A0A087XHT8   A0A3B4X3Z3   A0A146MKP3   A0A2P6KF50   A0A0F8AD47   V4A9F3   A0A3Q2ZDK0   A0A3Q2NUF1   I3JLU3   A0A3Q0R6D2   J9JJ22   A0A3Q1AXL3   A0A3Q3MBN0   A0A3P9HTS6   X1WP87   A0A3Q3X2B3   A0A3Q2YV76   A0A3Q1BJS5   A0A087YLI0   X1WW20   A0A2P6K297   A0A3Q4ASE0   A0A3Q0SCP5   A0A3B5LBX5   A0A287DEH8   A0A147AAK4   A0A146ZJP7   A0A3P8R268   A0A3B4U5G4   A0A146YZF7   A0A3P9B4C5   A0A3Q1ERZ1   A0A3Q0SJN5   A0A3P8RAE2   A0A3B4U132   A0A3Q2Z783   A0A087UHT5   A0A3Q2Y222   A0A3B4WU99   A0A3P8R2L0   A0A3P8S5G1   A0A146RQL3   A0A3Q1BX91   A0A3B4TXC2   A0A315VYA0   A0A2P6K572   A0A087TDG0   A0A2P6KPN3   A0A2P6K9Y8   A0A2P6K1M6   A0A0L8HUJ2   A0A3Q2YXI6   A0A3B4TZ98   A0A3Q1FB33   C3ZDM5   A0A3P8SJL2   A0A2P6K5F6   R7V818   G3NLR6   A0A3B3HP97   A0A0L8HVP4   A0A3Q2CBV3   A0A3P9B4A9   C3ZPQ0   D3ZIN6   A0A087U3D4   A0A087V162   C3ZUZ5  

EC Number

2.1.1.-

Pubmed

19121390    28756777    26227816    29451363    25835551    23254933    + More
25186727    17554307    29703783    18563158    15057822   

EMBL

BABH01034947    KZ150415    PZC70964.1    JTDY01000800    KOB75833.1    KOB75837.1    + More
GCES01046570    JAR39753.1    GCES01009232    JAR77091.1    GCES01149080    JAQ37242.1    ABLF02038601    GCES01096365    JAQ89957.1    GCES01130511    JAQ55811.1    GCES01139239    JAQ47083.1    KK117904    KFM71723.1    AYCK01023677    AYCK01023678    AYCK01023679    AYCK01023680    AYCK01023681    AYCK01023682    AYCK01023683    GCES01166730    JAQ19592.1    MWRG01013681    PRD24960.1    KQ043214    KKF09316.1    KB200701    ESP00624.1    AERX01055903    AERX01055904    AERX01055905    AERX01055906    AERX01055907    ABLF02033404    ABLF02029797    AYCK01001272    AYCK01001273    ABLF02029788    MWRG01038200    PRD20450.1    AGTP01019276    AGTP01019277    GCES01011078    JAR75245.1    GCES01019793    JAR66530.1    GCES01026855    JAR59468.1    KK119857    KFM76924.1    GCES01115895    JAQ70427.1    NHOQ01000797    PWA28608.1    MWRG01026172    PRD21467.1    KK114724    KFM63149.1    MWRG01007387    PRD28287.1    MWRG01018834    PRD23141.1    MWRG01042629    PRD20213.1    KQ417280    KOF92864.1    GG666612    EEN48831.1    MWRG01025837    PRD21530.1    AMQN01038589    KB294404    ELU14642.1    KOF92865.1    GG666659    EEN45471.1    AABR07002870    AABR07002896    KK117968    KFM71873.1    KL818556    KFM83351.1    GG666686    EEN43642.1   

Proteomes

UP000005204    UP000037510    UP000261560    UP000261660    UP000264820    UP000261620    + More
UP000007819    UP000261480    UP000261500    UP000054359    UP000265020    UP000028760    UP000261360    UP000030746    UP000265000    UP000005207    UP000261340    UP000257160    UP000265200    UP000261380    UP000005215    UP000265100    UP000261420    UP000265160    UP000257200    UP000265080    UP000053454    UP000001554    UP000014760    UP000007635    UP000001038    UP000002494   

PRIDE

H9JFF3    H9JFG8    D3ZIN6   

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF16622   zf-C2H2_11
PF01352   KRAB

Interpro

IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR003656   Znf_BED       
IPR017114   YY-1-like       
IPR011017   TRASH_dom       
IPR017125   Znf_PRDM5-like       
IPR041697   Znf-C2H2_11       
IPR001909   KRAB       
IPR036051   KRAB_dom_sf       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR017921   Znf_CTCHY       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

H9JFF3   A0A2W1BAG8   A0A0L7LJU2   A0A0L7LK64   H9JFG8   A0A3B3C4I9   + More
A0A3Q3FED3   A0A146XCF7   A0A147AF84   A0A3Q2Z8V3   A0A146P0B7   A0A3Q4AR89   J9JMS6   A0A146TB62   A0A146QI62   A0A3B3Z3J6   A0A146PSZ5   A0A3B3W1H6   A0A087U2Y4   A0A3Q2CMN1   A0A087XHT8   A0A3B4X3Z3   A0A146MKP3   A0A2P6KF50   A0A0F8AD47   V4A9F3   A0A3Q2ZDK0   A0A3Q2NUF1   I3JLU3   A0A3Q0R6D2   J9JJ22   A0A3Q1AXL3   A0A3Q3MBN0   A0A3P9HTS6   X1WP87   A0A3Q3X2B3   A0A3Q2YV76   A0A3Q1BJS5   A0A087YLI0   X1WW20   A0A2P6K297   A0A3Q4ASE0   A0A3Q0SCP5   A0A3B5LBX5   A0A287DEH8   A0A147AAK4   A0A146ZJP7   A0A3P8R268   A0A3B4U5G4   A0A146YZF7   A0A3P9B4C5   A0A3Q1ERZ1   A0A3Q0SJN5   A0A3P8RAE2   A0A3B4U132   A0A3Q2Z783   A0A087UHT5   A0A3Q2Y222   A0A3B4WU99   A0A3P8R2L0   A0A3P8S5G1   A0A146RQL3   A0A3Q1BX91   A0A3B4TXC2   A0A315VYA0   A0A2P6K572   A0A087TDG0   A0A2P6KPN3   A0A2P6K9Y8   A0A2P6K1M6   A0A0L8HUJ2   A0A3Q2YXI6   A0A3B4TZ98   A0A3Q1FB33   C3ZDM5   A0A3P8SJL2   A0A2P6K5F6   R7V818   G3NLR6   A0A3B3HP97   A0A0L8HVP4   A0A3Q2CBV3   A0A3P9B4A9   C3ZPQ0   D3ZIN6   A0A087U3D4   A0A087V162   C3ZUZ5  

PDB

5V3M     E-value=2.82763e-36,     Score=382

KEGG

101736044    no KO assigned | (RefSeq) zinc finger protein OZF-like

GO

GO:0003676   GO:0008270   GO:0005634   GO:0003677   GO:0046872   GO:0000976   GO:0016021   GO:0006355   GO:0010468   GO:0000979   GO:0006457   GO:0003906   GO:0006285   GO:0019104   GO:0003824  

Length:

532

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00757999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00183

outside

1  -  532

 

 

Pi

275.995493

Theta

230.673718

Tajima's D

0.573969

CLR

0

CSRT

0.538073096345183

Interpretation

Uncertain