Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO10592 | zf-C2H2 | 5.4e-19 | 0.00029 | 7 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 5.0 0.1 0.61 37 1 18 84 101 2 7.7 0.1 0.085 5.1 2 20 148 166 3 9.0 0.1 0.033 2 1 23 177 199 4 10.0 1.6 0.016 0.96 2 23 206 227 5 19.1 1.4 2.1e-05 0.0012 1 23 233 255 6 19.5 1.5 1.5e-05 0.0009 1 23 260 283 7 21.0 3.5 4.9e-06 0.00029 1 23 289 312 Alignments for each domain: == domain 1 score: 5.0 bits; conditional E-value: 0.61 EEETTTTEEESSHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkr 18 + C+ C k F + ++Lk+ KWMTBOMO10592 84 HICSNCEKIFHDMEELKK 101 67********99999875 PP == domain 2 score: 7.7 bits; conditional E-value: 0.085 EETTTTEEESSHHHHHHHH CS zf-C2H2 2 kCpdCgksFkrksnLkrHi 20 +C+ C + F + +L +H KWMTBOMO10592 148 TCKRCARNFENENDLAVHE 166 8*****************6 PP == domain 3 score: 9.0 bits; conditional E-value: 0.033 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y+C++Cg k+ L+rH+++H KWMTBOMO10592 177 YVCEICGVEMKSMARLNRHRSIH 199 99******************999 PP == domain 4 score: 10.0 bits; conditional E-value: 0.016 EETTTTEEESSHHHHHHHHHCC CS zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23 C C+++ ++ + L++H rtH KWMTBOMO10592 206 ACASCSYRGRTLYALRTHERTH 227 6999*****************9 PP == domain 5 score: 19.1 bits; conditional E-value: 2.1e-05 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 + Cp C ++F++ nL +H+r+H KWMTBOMO10592 233 HACPRCARTFRSAANLASHRRRH 255 56********************9 PP == domain 6 score: 19.5 bits; conditional E-value: 1.5e-05 EEETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23 y Cp C+k+F+ k++L++H+ H KWMTBOMO10592 260 YHCPTCTKPFRFKESLQNHLAAlH 283 89*****************98766 PP == domain 7 score: 21.0 bits; conditional E-value: 4.9e-06 EEETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23 ++C+ Cgk F ++ +L+rH r+ H KWMTBOMO10592 289 HVCNTCGKAFATRKLLCRHERRvH 312 79********************99 PP |
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