Gene

KWMTBOMO10592

Pre Gene Modal

BGIBMGA003913

Annotation

PREDICTED:_zinc_finger_protein_267-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr17(-):14890669-14895996      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.713

CDS

ATGCGGACGCAATCACCAAAGAATGAAATAGCGATGTCCAGAAAAAATGAAACCTTAAAGAAAAACTCAAGGAAAAAAAAATTCAAAATCATAATAGAAGAAAATTTGGATGTAGAAAGCCATCTCTGTAGACTGTGTCTTAACTCAGCTGAAAAGAGTTTATACAGCAATAACTTTACTTTTGATATCATGTACTATATTAAATTTGTTCTAGGAATAGAGGTAGCACAGAATGATGGCAGGCCTGATCACATTTGTAGCAACTGTGAGAAGATTTTCCATGACATGGAAGAATTGAAAAAGACAGCTAAAGCCACACAGAGGGTATTGGAACTTGAAATGACGTCAAATGCATTATCACAGCAAAAAGGTAATGGTGATTTACAATCAATTGAAATTGAACGCAATGAGAATCTTAATTCAGCTCCTACATTATTGTGGACTTGTAAAAGGTGTGCAAGGAACTTTGAAAACGAGAATGATCTAGCTGTACACGAGAAAGACGAAACTTGTTCGAAAGACAAGAGATATGTTTGTGAAATATGTGGTGTCGAAATGAAGTCGATGGCCAGACTAAACAGACACAGGTCAATACACAGTGACGTGCTACAACACGCGTGCGCGTCGTGTTCGTATCGGGGCCGCACGTTGTACGCGCTGCGCACGCACGAGCGCACGCACACGCGCGCCCGCCCGCACGCGTGCCCGCGGTGCGCGCGCACCTTCCGCAGCGCTGCCAACCTCGCCTCCCATCGACGGAGGCATCAGCCGCCGCGCTACCACTGTCCTACGTGTACGAAGCCCTTCAGGTTCAAGGAGAGTCTACAGAATCACTTGGCAGCCCTACACAGTACAGCTAAACCTCATGTCTGCAACACATGCGGAAAGGCCTTTGCTACACGAAAGCTACTCTGTCGCCATGAAAGAAGAGTTCACAATCGTCCAAAAATACGAGCAGGAAAAATGCCAACATATCTAAAACAGCAGCAAGACAATGTAACTTGA

Protein

MRTQSPKNEIAMSRKNETLKKNSRKKKFKIIIEENLDVESHLCRLCLNSAEKSLYSNNFTFDIMYYIKFVLGIEVAQNDGRPDHICSNCEKIFHDMEELKKTAKATQRVLELEMTSNALSQQKGNGDLQSIEIERNENLNSAPTLLWTCKRCARNFENENDLAVHEKDETCSKDKRYVCEICGVEMKSMARLNRHRSIHSDVLQHACASCSYRGRTLYALRTHERTHTRARPHACPRCARTFRSAANLASHRRRHQPPRYHCPTCTKPFRFKESLQNHLAALHSTAKPHVCNTCGKAFATRKLLCRHERRVHNRPKIRAGKMPTYLKQQQDNVT

Uniprot

H9J326   A0A2A4IYH1   A0A2H1VC51   A0A194RQM6   A0A1E1W6T3   A0A194PK55   + More
A0A2H1VT86   A0A194RP61   A0A2A4JG74   A0A194PJV7   A0A2A4JER5   A0A0L7KN53   A0A2H1WH54   A0A2H1W341   H9JMG1   A0A1E1WIZ6   H9JMG6   S4PGP2   A0A212EYL8   A0A2A4JFN6   A0A0L7K2S7   S4PD46   A0A194PI86   A0A0L7LRQ9   A0A212FG77   A0A194QTY8   A0A2H1VBX8   A0A3B5KA37   A0A1E1WB12   A0A1S3R628   A0A1S3L3G6   A0A2D0R299   A0A1S3R4P5   A0A3Q3FGZ4   A0A3B4C5X4   A0A182RSQ9   A0A3B5K972   D6X4Z7   W5LUN1   A0A3Q1AHG0   A0A1Y1K9G2   I3IZ37   G5BK82   A0A3Q1I511   A0A3Q1K2Y6   A0A1S3WWT0   A0A383ZYF6   A0A340XTM8   A0A1Y1L4E3   H2UH19  

Pubmed

19121390    26354079    26227816    23622113    22118469    21551351    + More
18362917    19820115    25329095    28004739    25186727    21993625   

EMBL

BABH01037652    NWSH01005491    PCG64163.1    ODYU01001747    SOQ38366.1    KQ459875    + More
KPJ19615.1    GDQN01008348    JAT82706.1    KQ459601    KPI93702.1    ODYU01004307    SOQ44037.1    KPJ19633.1    NWSH01001646    PCG70574.1    KPI93716.1    PCG70575.1    JTDY01008160    KOB64707.1    ODYU01008528    SOQ52212.1    ODYU01005946    SOQ47366.1    BABH01016863    GDQN01004061    JAT86993.1    BABH01016826    GAIX01003572    JAA88988.1    AGBW02011486    OWR46570.1    PCG70576.1    JTDY01015286    KOB51959.1    GAIX01003806    JAA88754.1    KQ459603    KPI93027.1    JTDY01000233    KOB78143.1    AGBW02008703    OWR52736.1    KQ461137    KPJ08779.1    ODYU01001731    SOQ38327.1    GDQN01006898    JAT84156.1    KQ971381    EEZ97217.1    GEZM01091073    GEZM01091072    JAV57121.1    AERX01055188    AERX01055189    AERX01055190    AERX01055191    AERX01055192    JH170699    EHB09693.1    GEZM01065112    JAV68552.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000007151    + More
UP000005226    UP000087266    UP000221080    UP000261660    UP000261440    UP000075900    UP000007266    UP000018467    UP000257160    UP000005207    UP000006813    UP000265040    UP000079721    UP000261681    UP000265300   

PRIDE

H9J326    H9JMG1    H9JMG6   

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2
PF00856   SET
PF01352   KRAB

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR001214   SET_dom       
IPR017114   YY-1-like       
IPR001909   KRAB       
IPR036051   KRAB_dom_sf       
IPR011017   TRASH_dom       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

H9J326   A0A2A4IYH1   A0A2H1VC51   A0A194RQM6   A0A1E1W6T3   A0A194PK55   + More
A0A2H1VT86   A0A194RP61   A0A2A4JG74   A0A194PJV7   A0A2A4JER5   A0A0L7KN53   A0A2H1WH54   A0A2H1W341   H9JMG1   A0A1E1WIZ6   H9JMG6   S4PGP2   A0A212EYL8   A0A2A4JFN6   A0A0L7K2S7   S4PD46   A0A194PI86   A0A0L7LRQ9   A0A212FG77   A0A194QTY8   A0A2H1VBX8   A0A3B5KA37   A0A1E1WB12   A0A1S3R628   A0A1S3L3G6   A0A2D0R299   A0A1S3R4P5   A0A3Q3FGZ4   A0A3B4C5X4   A0A182RSQ9   A0A3B5K972   D6X4Z7   W5LUN1   A0A3Q1AHG0   A0A1Y1K9G2   I3IZ37   G5BK82   A0A3Q1I511   A0A3Q1K2Y6   A0A1S3WWT0   A0A383ZYF6   A0A340XTM8   A0A1Y1L4E3   H2UH19  

PDB

2I13     E-value=1.58554e-14,     Score=192

KEGG

101741157    no KO assigned | (RefSeq) zinc finger protein 454-like

GO

GO:0005634   GO:0003676   GO:0008270   GO:0046872   GO:0006355   GO:0000166   GO:0003906   GO:0006285   GO:0019104   GO:0003824  

Length:

334

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.17039

Exp number, first 60 AAs:

0.0537

Total prob of N-in:

0.06289

outside

1  -  334

 

 

Pi

200.939954

Theta

164.87482

Tajima's D

0.296478

CLR

0.294535

CSRT

0.451177441127944

Interpretation

Uncertain