Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO10414 | zf-C2H2 | 4.1e-17 | 0.00011 | 6 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 13.8 0.3 0.00098 0.059 1 21 173 193 2 16.2 1.4 0.00016 0.0097 1 23 226 248 3 14.8 5.0 0.00045 0.027 1 23 254 276 4 22.4 1.2 1.8e-06 0.00011 1 23 282 304 5 21.5 0.5 3.4e-06 0.0002 1 23 309 332 6 16.7 4.0 0.00012 0.0069 1 23 337 360 Alignments for each domain: == domain 1 score: 13.8 bits; conditional E-value: 0.00098 EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFkrksnLkrHir 21 +kC+ C+ +F++k+ L++H+r KWMTBOMO10414 173 FKCSPCDVVFSTKEKLMVHRR 193 89*****************98 PP == domain 2 score: 16.2 bits; conditional E-value: 0.00016 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 +kCp C+k F+ Lk+H+++H KWMTBOMO10414 226 HKCPTCNKEFSILARLKNHMMIH 248 79*******************99 PP == domain 3 score: 14.8 bits; conditional E-value: 0.00045 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 + C+ C++++k k+ L+ H+rtH KWMTBOMO10414 254 FFCDLCPYKCKYKYYLVLHMRTH 276 78********************9 PP == domain 4 score: 22.4 bits; conditional E-value: 1.8e-06 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 ykC+ C+ +F ++snL++H tH KWMTBOMO10414 282 YKCTQCSATFVNPSNLNKHKLTH 304 9********************99 PP == domain 5 score: 21.5 bits; conditional E-value: 3.4e-06 EEETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23 ykC+ C k F+++s L++H+ H KWMTBOMO10414 309 YKCKMCEKAFRTNSALRQHREAaH 332 9******************97666 PP == domain 6 score: 16.7 bits; conditional E-value: 0.00012 EEETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23 ++C+ Cg+ F+ ks+L++H + H KWMTBOMO10414 337 HPCNLCGRDFCYKSDLRKHEIRsH 360 68*****************99888 PP |
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