Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO10151 | zf-NF-X1 | 5.4e-08 | 9.3e-06 | 7 | + View |
HMM length of domain: 19 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 -0.3 0.6 0.2 1.1e+03 6 18 10 14 2 25.5 13.7 1.6e-09 9.3e-06 1 19 20 38 3 -0.8 1.3 0.29 1.6e+03 8 11 43 46 4 -3.0 0.1 1.4 7.9e+03 17 18 56 57 5 -3.1 1.6 1.5 8.2e+03 13 15 67 69 6 19.1 14.5 1.7e-07 0.00093 1 18 75 92 7 -3.7 1.2 2.2 1.3e+04 1 1 104 104 Alignments for each domain: == domain 1 score: -0.3 bits; conditional E-value: 0.2 zf-NF-X1 6 CeklCHeGpCppC 18 C + pC KWMTBOMO10151 10 CGR--------PC 14 334........44 PP == domain 2 score: 25.5 bits; conditional E-value: 1.6e-09 zf-NF-X1 1 CGnHtCeklCHeGpCppCk 19 CG H+C+k CHeGpC+ C+ KWMTBOMO10151 20 CGVHKCMKECHEGPCEDCT 38 ******************5 PP == domain 3 score: -0.8 bits; conditional E-value: 0.29 zf-NF-X1 8 klCH 11 ++CH KWMTBOMO10151 43 QVCH 46 7999 PP == domain 4 score: -3.0 bits; conditional E-value: 1.4 zf-NF-X1 17 pC 18 pC KWMTBOMO10151 56 PC 57 45 PP == domain 5 score: -3.1 bits; conditional E-value: 1.5 zf-NF-X1 13 GpC 15 G C KWMTBOMO10151 67 GAC 69 444 PP == domain 6 score: 19.1 bits; conditional E-value: 1.7e-07 zf-NF-X1 1 CGnHtCeklCHeGpCppC 18 CG H C+++CHe pCppC KWMTBOMO10151 75 CGAHVCRSTCHEPPCPPC 92 ****************** PP == domain 7 score: -3.7 bits; conditional E-value: 2.2 zf-NF-X1 1 C 1 C KWMTBOMO10151 104 C 104 4 PP |
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