渝公网安备 50010602502065号
| Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
|---|---|---|---|---|---|
| KWMTBOMO10089 | zf-C2H2 | 3.2e-49 | 6.7e-05 | 19 | + View |
HMM length of domain: 23 aa
c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified.
Domain annotation for each sequence:
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to
-- ----- ---- -------- -------- ------- ------ ------- ------
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 2.6 1.4 3.5 2.1e+02 1 22 18 39
2 16.6 3.3 0.00012 0.0073 1 23 61 83
3 3.0 1.7 2.6 1.5e+02 5 23 91 110
4 22.2 0.8 2.1e-06 0.00012 1 23 174 196
5 18.0 0.3 4.6e-05 0.0028 3 23 204 224
6 4.9 0.9 0.63 38 2 10 231 239
7 19.6 0.6 1.4e-05 0.00082 1 23 258 280
8 19.5 0.4 1.5e-05 0.00092 1 23 286 308
9 18.5 0.8 3e-05 0.0018 1 23 314 336
10 16.9 3.9 9.7e-05 0.0058 1 23 342 365
11 8.0 3.1 0.066 4 1 20 371 390
12 7.0 0.3 0.14 8.5 1 23 426 449
13 9.7 0.8 0.02 1.2 2 21 453 472
14 12.9 2.5 0.0018 0.11 1 23 476 498
15 14.9 2.5 0.00043 0.026 1 23 507 530
16 17.7 1.6 5.4e-05 0.0032 1 23 537 560
17 10.7 0.8 0.0092 0.55 2 21 565 584
18 17.3 0.8 7.3e-05 0.0044 3 23 595 615
19 23.0 0.7 1.1e-06 6.7e-05 1 23 621 644
Alignments for each domain:
== domain 1 score: 2.6 bits; conditional E-value: 3.5
EEETTTTEEESSHHHHHHHHHC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt 22
y C+ C+ F ++ + + H+ +
KWMTBOMO10089 18 YSCDQCPLGFLDQTDWCLHQTK 39
89********999999999876 PP
== domain 2 score: 16.6 bits; conditional E-value: 0.00012
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
++CpdC+k+F + s Lk+H +H
KWMTBOMO10089 61 HQCPDCNKKFVHESTLKAHSFVH 83
79*****************7776 PP
== domain 3 score: 3.0 bits; conditional E-value: 2.6
TTTEEESSHHHHHHHHHC.C CS
zf-C2H2 5 dCgksFkrksnLkrHirt.H 23
+Cg + + +Lk H + H
KWMTBOMO10089 91 HCGVAYYKSCDLKDHKKLvH 110
7**************99988 PP
== domain 4 score: 22.2 bits; conditional E-value: 2.1e-06
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y Cp+C+k+Fk+k n ++H tH
KWMTBOMO10089 174 YSCPICNKTFKNKGNVVKHKVTH 196
89*****************9998 PP
== domain 5 score: 18.0 bits; conditional E-value: 4.6e-05
ETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23
C+ C+ +F++k +L+ H+++H
KWMTBOMO10089 204 CELCDARFTQKGSLNIHMKRH 224
9*******************9 PP
== domain 6 score: 4.9 bits; conditional E-value: 0.63
EETTTTEEE CS
zf-C2H2 2 kCpdCgksF 10
kC +Cgk F
KWMTBOMO10089 231 KCQYCGKEF 239
7******99 PP
== domain 7 score: 19.6 bits; conditional E-value: 1.4e-05
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y+C++Cgk F ++s rH r+H
KWMTBOMO10089 258 YECKHCGKAFADRSATIRHERIH 280
99*******************99 PP
== domain 8 score: 19.5 bits; conditional E-value: 1.5e-05
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
ykC++C+k F++ s rH+ +H
KWMTBOMO10089 286 YKCEYCSKGFTDASGVIRHRLMH 308
9*******************999 PP
== domain 9 score: 18.5 bits; conditional E-value: 3e-05
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
+ C +C+k+F + +L+ H+ +H
KWMTBOMO10089 314 FACRICDKTFYTTTDLRIHLLSH 336
78******************999 PP
== domain 10 score: 16.9 bits; conditional E-value: 9.7e-05
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y+C++C+ F+ k nL +Hirt H
KWMTBOMO10089 342 YQCDYCKNYFTKKCNLINHIRTiH 365
9*********************99 PP
== domain 11 score: 8.0 bits; conditional E-value: 0.066
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHi 20
y+C++C k F+ n+ +H
KWMTBOMO10089 371 YRCTECFKNFSGTTNMIKHK 390
9******************5 PP
== domain 12 score: 7.0 bits; conditional E-value: 0.14
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y C+ C+ ++ k +L rH+ + H
KWMTBOMO10089 426 YLCDNCPNQYTWKWDLIRHMLKqH 449
66*******************999 PP
== domain 13 score: 9.7 bits; conditional E-value: 0.02
EETTTTEEESSHHHHHHHHH CS
zf-C2H2 2 kCpdCgksFkrksnLkrHir 21
kC++C F+++s+LkrH r
KWMTBOMO10089 453 KCKKCLSYFSSNSDLKRHNR 472
8*****************76 PP
== domain 14 score: 12.9 bits; conditional E-value: 0.0018
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
+kC++C+k + +k+Hi++H
KWMTBOMO10089 476 FKCKKCDKNLESEQTYKSHIKKH 498
8*********************9 PP
== domain 15 score: 14.9 bits; conditional E-value: 0.00043
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y C++C+ F+ + +L++H+r H
KWMTBOMO10089 507 YSCTKCDCAFSLPASLTNHYRLkH 530
89*******************999 PP
== domain 16 score: 17.7 bits; conditional E-value: 5.4e-05
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y+C++C+k+F++k +L++H + H
KWMTBOMO10089 537 YECDHCKKVFNTKLLLVSHVKDsH 560
99*****************99877 PP
== domain 17 score: 10.7 bits; conditional E-value: 0.0092
EETTTTEEESSHHHHHHHHH CS
zf-C2H2 2 kCpdCgksFkrksnLkrHir 21
+C++C+k+F + ++++H r
KWMTBOMO10089 565 YCDVCKKKFYSETEFRQHKR 584
6*****************98 PP
== domain 18 score: 17.3 bits; conditional E-value: 7.3e-05
ETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 3 CpdCgksFkrksnLkrHirtH 23
C++C+k+F+r+ L +H+ H
KWMTBOMO10089 595 CEICDKTFTRRKGLSSHLLFH 615
*****************9877 PP
== domain 19 score: 23.0 bits; conditional E-value: 1.1e-06
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y+C++Cgk+Fk k +L Hir+ H
KWMTBOMO10089 621 YECDYCGKKFKLKNLLAIHIRRkH 644
99********************99 PP
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渝公网安备 50010602502065号