HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	7.4	0.0	0.11	6.4	3	23	282	302
2	18.0	0.6	4.3e-05	0.0026	2	23	325	347
3	15.8	4.7	0.00023	0.014	2	23	357	378
4	24.6	0.4	3.5e-07	2.1e-05	1	23	384	407

  Alignments for each domain:
  == domain 1  score: 7.4 bits;  conditional E-value: 0.11
                    ETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 CpdCgksFkrksnLkrHirtH 23 
                    C+ C ++F+ +   +rH + H
  KWMTBOMO13404 282 CELCAEVFTVPAAWVRHVQGH 302
                    *****************9988 PP

  == domain 2  score: 18.0 bits;  conditional E-value: 4.3e-05
                    EETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirt.H 23 
                    +C+ C k F+++ + +rHi++ H
  KWMTBOMO13404 325 RCDLCQKHFPNPAQWVRHIQStH 347
                    8*******************999 PP

  == domain 3  score: 15.8 bits;  conditional E-value: 0.00023
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                    +C +C+k+F++  ++  H+rtH
  KWMTBOMO13404 357 TCAHCKKTFPSHASMLIHMRTH 378
                    7********************9 PP

  == domain 4  score: 24.6 bits;  conditional E-value: 3.5e-07
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    ++C+ C+k F+ ksnL rH+rt H
  KWMTBOMO13404 384 FVCGLCNKGFNVKSNLLRHLRTlH 407
                    89********************99 PP