Gene

KWMTBOMO10089

Pre Gene Modal

BGIBMGA005546

Annotation

PREDICTED:_zinc_finger_protein_850-like_isoform_X3_[Monodelphis_domestica]

Location

Bomo_Chr17(+):2148164-2153578      View in EpiBrowser

Full name

Zinc finger protein       + More
Zinc finger protein 84      

Alternative Name

Zinc finger protein HPF2

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.296

CDS

ATGGCACAATTACTCCGCGAAGTTAAGGTAGTGTTAGATCGTGTAAAAATCTACAGTTGCGACCAATGTCCACTCGGATTCCTCGACCAGACTGATTGGTGTTTGCACCAAACAAAATTCTCGCATATCAAAGAAAAAGAAGAAAACTTGTCTAACAATAACAACAAGTACATTAAAGTCCATCAGTGTCCCGATTGTAATAAAAAATTCGTTCATGAGAGCACGTTGAAGGCGCACTCGTTCGTTCATGAACCTATCCCTTATGTCTGTCACTGCGGCGTTGCATACTACAAGAGTTGCGACCTGAAGGATCACAAGAAACTCGTACATTCCGACGAAATGTCAATTGAAAGTATTGAAGAAGCCATTGAACCTGTCAAAACGAAAACCTCCAAACCGAAAATGAAATCTGTGCAAATCAAGAAATTAAAAAATAAAAAAATTCGAGGAAGGAATTCAAAGCCGGGTAGTCAAAAGATAAAACATAATTTTGATAAAAAACTAAACGACAATCTAGTTTATTCATGTCCGATTTGTAATAAAACGTTTAAAAATAAAGGGAATGTTGTAAAACACAAAGTAACGCACTCCGAAGTGAAACCGTACGGGTGTGAACTGTGTGATGCACGATTCACGCAAAAAGGATCCTTAAATATACATATGAAAAGGCACGCCGGTATCAAAGATGAGAAATGTCAATATTGCGGCAAAGAATTTCTTGGACGCCACGCGAGAATCAATCACGAATATACACACACGAAAGTCAAACCTTATGAATGTAAACATTGCGGGAAGGCATTCGCCGATCGTTCGGCCACGATACGCCACGAGCGGATCCACACGCGCGATATGAAATACAAATGTGAATATTGCAGTAAGGGTTTCACGGACGCGAGCGGCGTCATAAGACATCGCCTTATGCACAAAGGAAAGAAGGATTTCGCCTGTCGAATTTGTGATAAAACATTTTACACCACAACGGATCTACGAATCCATCTTTTATCGCATACGGCAGTGAAAGATTACCAGTGCGATTATTGCAAGAATTATTTCACGAAAAAATGCAACCTCATTAATCACATCAGAACAATACATTATGGCCAAAAGTTGTATCGATGCACGGAATGTTTTAAAAACTTTTCGGGAACCACCAACATGATTAAGCACAAATGTCCGAATTCGGTGAATAAAAATCTCATAAAATGCGAACTGTGCGGTCTGCGAACCAGAGACATAAGTAAACACACAAAAAGCTTTCACACTAAAAACCACTTCTATCTTTGTGATAACTGTCCTAACCAATATACGTGGAAATGGGACTTAATACGCCACATGCTTAAGCAACATATAAAGATCAAATGCAAAAAATGCTTAAGCTATTTCTCAAGCAATTCCGATCTGAAGAGACATAATCGTATAGGATGTTTCAAATGCAAAAAGTGTGATAAAAATCTTGAAAGTGAGCAAACTTATAAGTCTCATATAAAAAAACATGCAAAAAAGGAGGAGTTTGCCAAATACTCGTGCACTAAATGTGATTGTGCTTTTTCGCTACCCGCATCGCTGACCAACCATTACCGGCTAAAACATCTCACCGACCCAGCTTATTACGAATGCGACCATTGCAAAAAAGTATTTAATACAAAATTACTTTTAGTTTCGCACGTTAAGGACAGTCACATGAACGCTTTGTACTGTGATGTGTGTAAAAAGAAGTTTTATTCGGAAACTGAATTCAGACAACACAAACGTATAGTCTGTCAATCTCCGGGGAATTGGTTTTGCGAGATTTGCGACAAAACGTTCACCAGAAGGAAGGGCTTGTCGTCTCATTTGTTGTTTCATTCGTCAACAGCTTCATACGAATGCGACTATTGCGGGAAGAAATTTAAACTAAAAAATCTTTTGGCGATCCACATCAGAAGGAAACATATAAAGGAAACCAGAAAAGTACCTAAGAAACAACCTAAAAGTCTGGTTTTCATTTTTTGA

Protein

MAQLLREVKVVLDRVKIYSCDQCPLGFLDQTDWCLHQTKFSHIKEKEENLSNNNNKYIKVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHKKLVHSDEMSIESIEEAIEPVKTKTSKPKMKSVQIKKLKNKKIRGRNSKPGSQKIKHNFDKKLNDNLVYSCPICNKTFKNKGNVVKHKVTHSEVKPYGCELCDARFTQKGSLNIHMKRHAGIKDEKCQYCGKEFLGRHARINHEYTHTKVKPYECKHCGKAFADRSATIRHERIHTRDMKYKCEYCSKGFTDASGVIRHRLMHKGKKDFACRICDKTFYTTTDLRIHLLSHTAVKDYQCDYCKNYFTKKCNLINHIRTIHYGQKLYRCTECFKNFSGTTNMIKHKCPNSVNKNLIKCELCGLRTRDISKHTKSFHTKNHFYLCDNCPNQYTWKWDLIRHMLKQHIKIKCKKCLSYFSSNSDLKRHNRIGCFKCKKCDKNLESEQTYKSHIKKHAKKEEFAKYSCTKCDCAFSLPASLTNHYRLKHLTDPAYYECDHCKKVFNTKLLLVSHVKDSHMNALYCDVCKKKFYSETEFRQHKRIVCQSPGNWFCEICDKTFTRRKGLSSHLLFHSSTASYECDYCGKKFKLKNLLAIHIRRKHIKETRKVPKKQPKSLVFIF

Similarity

Belongs to the krueppel C2H2-type zinc-finger protein family.

Keywords

Complete proteome   DNA-binding   Isopeptide bond   Metal-binding   Nucleus   Phosphoprotein   Reference proteome   Repeat   Transcription   Transcription regulation   Ubl conjugation   Zinc   Zinc-finger  

Feature

chain  Zinc finger protein 84

Uniprot

A0A3S2M3J5   F6TR60   J9JJH7   F7C0M3   H0ZZD4   F7FXK7   + More
F6X0W8   A0A1S3QL15   A0A1S3QKD3   A0A2Y9ISL0   F7GDH0   A0A0L8I273   J9JPB3   A0A0L8HAP0   A0A2Y9H8J9   J9JMS6   H9H757   A0A3Q7PMZ0   A0A2J8JPM2   A0A2J8JPP1   F7A9Y4   W5LRU1   J9JWR5   F7BM42   A0A0L8IDE1   A0A3Q7UTQ4   F7FPT7   H0XPQ6   G5C293   F7EXI7   A0A3Q7VSK2   A0A2U3ZVK6   X1WW20   W5LFU2   A0A341D0H9   X1WP87   H9H8C6   A0A3B1KLL1   A0A3Q7Y289   F6X6H7   A0A0L8HFF0   A0A3Q7S2N5   A0A0L8HX39   F6ZJT1   A0A2Y9IT66   J9L823   A0A384DSQ5   M3XQ14   J9JKW3   A0A091DAV7   A0A2Y9ITS0   F6U517   A0A1U7TKY9   J9K1Q9   G3W7I4   H0XJH4   A0A1S3AIW8   A0A2Y9SCJ4   F6X371   K7EUU3   A0A0D9S5S4   A0A2K5IKX8   F6Y3S2   H0XZ74   A0A2U3ZJR3   F6V3T2   A0A0L8GUV7   A0A0L8G7W2   A0A2I3RYM3   A0A2Y9RA64   M3Z9Q9   L5K5A0   A0A2R8ZKV1   A0A2I3GKU1   A0A2R8ZDS5   A0A2J8RAU4   A0A2Y9PBR1   A0A2J8RAV2   F7GE85   F1MVJ7   A0A2J8IMF2   F5H630   A0A2I3SZ32   P51523   G1RPI5   W5P0X7   A0A0L8GIV4   A0A2F0B586   A0A2K5IL69   I3KI15   K7F0P6   F6U6V5   F7G350   S7PAI6   F7EXK9   A0A2I2U4T4   A0A3Q2E019   A0A1S3WSH5   A0A340X1W4  

EC Number

2.1.1.-

Pubmed

17495919    20360741    25329095    21993625    21709235    16136131    + More
23258410    22722832    19393038    16541075    21406692    23186163    28112733    2505992    14702039    15489334    1945843    20809919    25186727    17381049    17975172   

EMBL

RSAL01000048    RVE50477.1    ABLF02005500    ABLF02005501    ABLF02009116    ABLF02009117    + More
ABLF02009118    ABLF02009119    ABLF02060218    ABLF02063036    ABLF02066102    ABLF02066235    ABQF01061477    ABQF01061478    ABQF01061479    ABQF01061480    ABQF01061481    ABQF01061482    ABQF01061483    ABQF01061484    ABQF01061485    ABQF01061486    KQ416731    KOF95499.1    ABLF02011791    ABLF02011792    KQ418671    KOF86356.1    ABLF02038601    NBAG03000435    PNI24729.1    PNI24731.1    ABLF02038588    ABLF02038606    ABLF02038607    KQ415945    KOF99518.1    AAQR03175431    AAQR03175432    AAQR03175433    AAQR03175434    AAQR03175435    AAQR03175436    AAQR03175437    AAQR03175438    AAQR03175439    AAQR03175440    JH172976    EHB15654.1    ABLF02029788    ABLF02029797    KQ418295    KOF87946.1    KQ417191    KOF93365.1    ABLF02009695    ABLF02018750    ABLF02061073    ABLF02063523    AEYP01031128    ABLF02007945    ABLF02021897    ABLF02057411    KN122922    KFO27410.1    ABLF02011913    AEFK01223945    AAQR03169668    AAQR03169669    AAQR03169670    ABGA01180521    ABGA01180522    AQIB01153263    AQIB01153264    AAQR03028320    KQ420308    KOF80672.1    KQ423329    KOF73101.1    AACZ04065316    ADFV01132609    ADFV01132610    KB031041    ELK05663.1    AJFE02106351    ADFV01006642    ADFV01006643    AJFE02047596    AJFE02047597    NDHI03003721    PNJ05624.1    PNJ05623.1    PNJ05625.1    PNJ05629.1    NBAG03000703    PNI11704.1    AC073911    AACZ04060465    GABE01006638    JAA38101.1    PNI11703.1    PNI11705.1    PNI11709.1    M27878    X60156    AK314232    CH471218    BC036656    BC048350    BC062552    AMGL01066170    KQ421646    KOF76936.1    NTJE010075649    MBV98179.1    AERX01044813    AERX01044814    AERX01044815    AERX01044816    AERX01044817    AERX01044818    AERX01044819    AERX01044820    AERX01044821    AERX01044822    AGCU01065352    KE162126    EPQ07168.1    AANG04003548   

Proteomes

UP000283053    UP000002280    UP000007819    UP000007754    UP000087266    UP000248482    + More
UP000053454    UP000248481    UP000286641    UP000018467    UP000286642    UP000005225    UP000006813    UP000245340    UP000252040    UP000286640    UP000261680    UP000000715    UP000028990    UP000189704    UP000007648    UP000079721    UP000248484    UP000001595    UP000029965    UP000233080    UP000002277    UP000248480    UP000001073    UP000010552    UP000240080    UP000248483    UP000009136    UP000005640    UP000002356    UP000005207    UP000007267    UP000011712    UP000265020    UP000265300   

PRIDE

F5H630    P51523   

Pfam

PF00096   zf-C2H2        + More
PF01352   KRAB
PF02023   SCAN

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR017125   Znf_PRDM5-like       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       
IPR017114   YY-1-like       
IPR011017   TRASH_dom       
IPR003309   SCAN_dom       
IPR038269   SCAN_sf       
IPR003656   Znf_BED       
IPR001965   Znf_PHD       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

Gene 3D

1.10.4020.10    

CDD

cd07765  KRAB_A-box
cd07936  SCAN

ProteinModelPortal

A0A3S2M3J5   F6TR60   J9JJH7   F7C0M3   H0ZZD4   F7FXK7   + More
F6X0W8   A0A1S3QL15   A0A1S3QKD3   A0A2Y9ISL0   F7GDH0   A0A0L8I273   J9JPB3   A0A0L8HAP0   A0A2Y9H8J9   J9JMS6   H9H757   A0A3Q7PMZ0   A0A2J8JPM2   A0A2J8JPP1   F7A9Y4   W5LRU1   J9JWR5   F7BM42   A0A0L8IDE1   A0A3Q7UTQ4   F7FPT7   H0XPQ6   G5C293   F7EXI7   A0A3Q7VSK2   A0A2U3ZVK6   X1WW20   W5LFU2   A0A341D0H9   X1WP87   H9H8C6   A0A3B1KLL1   A0A3Q7Y289   F6X6H7   A0A0L8HFF0   A0A3Q7S2N5   A0A0L8HX39   F6ZJT1   A0A2Y9IT66   J9L823   A0A384DSQ5   M3XQ14   J9JKW3   A0A091DAV7   A0A2Y9ITS0   F6U517   A0A1U7TKY9   J9K1Q9   G3W7I4   H0XJH4   A0A1S3AIW8   A0A2Y9SCJ4   F6X371   K7EUU3   A0A0D9S5S4   A0A2K5IKX8   F6Y3S2   H0XZ74   A0A2U3ZJR3   F6V3T2   A0A0L8GUV7   A0A0L8G7W2   A0A2I3RYM3   A0A2Y9RA64   M3Z9Q9   L5K5A0   A0A2R8ZKV1   A0A2I3GKU1   A0A2R8ZDS5   A0A2J8RAU4   A0A2Y9PBR1   A0A2J8RAV2   F7GE85   F1MVJ7   A0A2J8IMF2   F5H630   A0A2I3SZ32   P51523   G1RPI5   W5P0X7   A0A0L8GIV4   A0A2F0B586   A0A2K5IL69   I3KI15   K7F0P6   F6U6V5   F7G350   S7PAI6   F7EXK9   A0A2I2U4T4   A0A3Q2E019   A0A1S3WSH5   A0A340X1W4  

PDB

5V3M     E-value=7.29332e-32,     Score=345

KEGG

101743482    K09228 KRAB domain-containing zinc finger protein | (RefSeq) zinc finger protein 208-like

GO

GO:0003677   GO:0005634   GO:0000976   GO:0046872   GO:0006355   GO:0003676   GO:0003700   GO:0045629   GO:0002437   GO:0000981   GO:0008270   GO:0004252   GO:0005515   GO:0005737   GO:0008152   GO:0016301   GO:0016773   GO:0016155   GO:0003824  

Subcellular location

Nucleus  

Length:

663

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0002

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00032

outside

1  -  663

 

 

Pi

180.396745

Theta

178.333466

Tajima's D

-0.426937

CLR

119.86638

CSRT

0.261986900654967

Interpretation

Uncertain