HMM length of domain: 79 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	77.8	0.0	5.8e-26	4.9e-22	3	67	141	206
2	89.2	0.0	1.6e-29	1.3e-25	4	76	536	609
3	86.4	0.0	1.2e-28	9.8e-25	3	74	739	811

  Alignments for each domain:
  == domain 1  score: 77.8 bits;  conditional E-value: 5.8e-26
            CUT   3 eeldtkdiaqkvkeeLkrasisqavFAekvlnrsqgtlselLrkPkpwenlka.grevyirmqnwL 67 
                    ++ldt  i +kv+e L+ ++i q++FA+ vl+ sqgt+selL+kPkpw++l++ gr+ y++m+ w 
  KWMTBOMO09977 141 SNLDTLHISRKVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEkGRDSYRKMHAWA 206
                    689**************************************************************6 PP

  == domain 2  score: 89.2 bits;  conditional E-value: 1.6e-29
            CUT   4 eldtkdiaqkvkeeLkrasisqavFAekvlnrsqgtlselLrkPkpwenlka.grevyirmqnwLnlpeserde 76 
                    +l+t++i+++vke L+++sisq++F+e vl+ sqg++s+lL++Pkpw++l++ gre++irm+ +L+++++++++
  KWMTBOMO09977 536 NLNTEEIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQkGREPFIRMKMFLEDDNAVHKL 609
                    799*****************************************************************998876 PP

  == domain 3  score: 86.4 bits;  conditional E-value: 1.2e-28
            CUT   3 eeldtkdiaqkvkeeLkrasisqavFAekvlnrsqgtlselLrkPkpwenlka.grevyirmqnwLnlpeser 74 
                    ++ldt++i+ k+ke L +++i q++F+e vl+ sqg++selL+kPkpw++l+  gre++irmq wL++ ++  
  KWMTBOMO09977 739 QDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIkGREPFIRMQLWLSDAHNID 811
                    689****************************************************************998865 PP