HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	23.6	2.7	7.4e-07	4.4e-05	1	23	121	143
2	21.1	0.1	4.5e-06	0.00027	3	23	149	171
3	18.9	1.8	2.3e-05	0.0014	1	23	177	200

  Alignments for each domain:
  == domain 1  score: 23.6 bits;  conditional E-value: 7.4e-07
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C+dC+k F ++  L +H+r+H
  KWMTBOMO09826 121 YVCGDCNKNFETWKKLYHHQRSH 143
                    9*********************9 PP

  == domain 2  score: 21.1 bits;  conditional E-value: 4.5e-06
                    ET..TTTEEESSHHHHHHHHHCC CS
        zf-C2H2   3 Cp..dCgksFkrksnLkrHirtH 23 
                    Cp   Cgk F +k +L++H rtH
  KWMTBOMO09826 149 CPleACGKAFATKGDLEKHKRTH 171
                    77778*****************9 PP

  == domain 3  score: 18.9 bits;  conditional E-value: 2.3e-05
                    EEETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt.H 23 
                    y+C++C k+++++  Lk+H  t H
  KWMTBOMO09826 177 YQCEICEKCYTQRVTLKVHKETvH 200
                    9******************99988 PP