SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09826
Pre Gene Modal
BGIBMGA013124
Annotation
hypothetical_protein_KGM_08620_[Danaus_plexippus]
Transcription factor
Location in the cell
Nuclear   Reliability : 4.677
 

Sequence

CDS
ATGGATAAACTACCACAAAAAGTATGTCAGAAATGTGTAGATGTAATACAAGATGCAAATAAACTGAGAAATTTGGCTCTAAGAAATGAGTCTAATTTGCAATGCCTGTTTGGCGATGAAAGTAGGGATGAAATTACAGATGAGTTGAATCAAATCAAGAGTCACATAGTGAATAATTTCAATGAAAGCGAGTCAACAGTTGAAAAGGTTAAAAACAAAAAAGACAAAAGAAAAAATGAAAATAACTCTACACATCATCAGCAAACGTTGCCGGAAAGAAATACTTCAAGGAACAAGACGAAATCAGAAACACATTTAAAGAGCAAGCGACGGCGTGACTCCGAAAATGAAGACGTCTTATATGTGTGCGGGGATTGTAATAAGAACTTCGAGACGTGGAAGAAACTGTACCACCACCAGCGGTCGCACACCAAGAGCATGGCGTGTCCGCTGGAGGCCTGCGGGAAGGCGTTCGCAACTAAAGGCGATTTAGAGAAACACAAGCGCACGCACACCGGAGAGAAACCTTACCAGTGCGAGATATGTGAGAAGTGTTACACACAAAGAGTCACGCTAAAAGTCCACAAGGAAACGGTCCATGGAGTCCAGGCTACCGCGGCGACCAGTCGGGACCATCCTAAACCGGCCAGTGGTCAAGGGACCACGAAACTTGGTGCAAAGTTAAAAAACACCTGA
Protein
MDKLPQKVCQKCVDVIQDANKLRNLALRNESNLQCLFGDESRDEITDELNQIKSHIVNNFNESESTVEKVKNKKDKRKNENNSTHHQQTLPERNTSRNKTKSETHLKSKRRRDSENEDVLYVCGDCNKNFETWKKLYHHQRSHTKSMACPLEACGKAFATKGDLEKHKRTHTGEKPYQCEICEKCYTQRVTLKVHKETVHGVQATAATSRDHPKPASGQGTTKLGAKLKNT

Summary

Pfam
PF00096   zf-C2H2        + More
PF07776   zf-AD
Interpro
IPR013087   Znf_C2H2_type        + More
IPR027756   Ovo-like       
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
SUPFAM
SSF57667   SSF57667       
PDB
2I13     E-value=3.32911e-12,     Score=170

Ontologies

Topology

Length:
231
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.14234
outside
1  -  231
 
 

Population Genetic Test Statistics

Pi
212.279126
Theta
160.998617
Tajima's D
0.988566
CLR
0.011804
CSRT
0.661966901654917
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号