HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	12.9	0.3	0.0019	0.11	2	23	43	65
2	19.9	0.1	1.1e-05	0.00067	1	23	69	91
3	13.4	6.9	0.0013	0.077	1	23	99	123
4	20.3	5.1	8.3e-06	0.0005	2	23	130	151
5	9.9	0.9	0.017	1	2	23	158	181

  Alignments for each domain:
  == domain 1  score: 12.9 bits;  conditional E-value: 0.0019
                   EETTTTEEESSHHHHHHHHHC.C CS
        zf-C2H2  2 kCpdCgksFkrksnLkrHirt.H 23
                   +C++Cg +F++  +LkrH +  H
  KWMTBOMO09226 43 QCNKCGGKFRDEVLLKRHFNYaH 65
                   7*****************98877 PP

  == domain 2  score: 19.9 bits;  conditional E-value: 1.1e-05
                   EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2  1 ykCpdCgksFkrksnLkrHirtH 23
                   + C++Cg sF++k  L++H+++H
  KWMTBOMO09226 69 FICEECGASFSSKPALRTHLKIH 91
                   78*******************99 PP

  == domain 3  score: 13.4 bits;  conditional E-value: 0.0013
                    EEET..TTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCp..dCgksFkrksnLkrHirtH 23 
                    ykC+  +C k+F+ +++Lk+H  tH
  KWMTBOMO09226  99 YKCSvnGCRKTFNFPHHLKHHELTH 123
                    9*********************999 PP

  == domain 4  score: 20.3 bits;  conditional E-value: 8.3e-06
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                     C++Cgk F ++++Lk+H+rtH
  KWMTBOMO09226 130 FCSICGKGFIQSHHLKAHLRTH 151
                    6********************9 PP

  == domain 5  score: 9.9 bits;  conditional E-value: 0.017
                    EET..TTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCp..dCgksFkrksnLkrHirtH 23 
                    +C+   C+k+F + +  krH+ tH
  KWMTBOMO09226 158 YCDvtNCKKKFATDYARKRHQETH 181
                    588889*****************9 PP