HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	16.8	0.7	0.00011	0.0064	1	23	117	139
2	17.3	2.2	7.2e-05	0.0043	1	23	330	352
3	17.0	0.1	9e-05	0.0054	1	23	358	380
4	20.8	3.6	5.6e-06	0.00034	1	23	386	408
5	20.5	0.4	7e-06	0.00042	1	23	414	436
6	19.6	0.5	1.4e-05	0.00084	1	23	442	464
7	15.8	0.1	0.00022	0.013	1	23	470	492

  Alignments for each domain:
  == domain 1  score: 16.8 bits;  conditional E-value: 0.00011
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC++Cg +F +  +L++H r+H
  KWMTBOMO08821 117 FKCDVCGLMFGHLTLLTAHKRIH 139
                    8********************99 PP

  == domain 2  score: 17.3 bits;  conditional E-value: 7.2e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    + C++Cg sF+r s+L +H + H
  KWMTBOMO08821 330 FHCNICGGSFSRYSSLWSHKKLH 352
                    78*******************99 PP

  == domain 3  score: 17.0 bits;  conditional E-value: 9e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC++Cg  F     Lk+H r+H
  KWMTBOMO08821 358 FKCGICGIAFAKAVYLKNHSRIH 380
                    8********************99 PP

  == domain 4  score: 20.8 bits;  conditional E-value: 5.6e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C+ Cg+ F+++ +Lk+H rtH
  KWMTBOMO08821 386 YRCKTCGMQFSQSPHLKNHERTH 408
                    9*********************9 PP

  == domain 5  score: 20.5 bits;  conditional E-value: 7e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    y+C++C+k F r   L +H+r+H
  KWMTBOMO08821 414 YVCEVCDKGFARHATLWNHRRIH 436
                    9*********************9 PP

  == domain 6  score: 19.6 bits;  conditional E-value: 1.4e-05
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ykC+ Cg  F++  +Lk+H ++H
  KWMTBOMO08821 442 YKCETCGSAFSQAAHLKNHAKVH 464
                    9********************99 PP

  == domain 7  score: 15.8 bits;  conditional E-value: 0.00022
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    +kC++C+  F ++  LkrH+ +H
  KWMTBOMO08821 470 FKCDICTAAFADRFALKRHRGIH 492
                    8******************9877 PP