Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO08726 | SF-like | 1.6e-13 | 7.7e-10 | 3 | + View |
HMM length of domain: 411 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 -1.7 0.5 0.99 1.4e+03 91 114 122 145 2 19.1 0.1 4.7e-07 0.00066 1 19 438 456 3 38.6 0.0 5.5e-13 7.7e-10 164 240 499 586 Alignments for each domain: == domain 1 score: -1.7 bits; conditional E-value: 0.99 SF-like 91 seslsrsvppllretlpaayqyee 114 +s ++s + l + t++a+ + +e KWMTBOMO08726 122 LQSSRDSIDTLRNVTIKAEPLKNE 145 222233333333333333222221 PP == domain 2 score: 19.1 bits; conditional E-value: 4.7e-07 SF-like 1 AVRaDRmRGGRnkFgplYk 19 A+R+DR+RGGR++++++Y KWMTBOMO08726 438 AIREDRTRGGRSTYQCSYP 456 9*****************5 PP == domain 3 score: 38.6 bits; conditional E-value: 5.5e-13 SF-like 164 easstvpiLilellklekdedqvknkilA.klqqeqasr...........kktekpekfallckvAdqtLfsiVeWAkssqlFkeLkvd 240 + + +p+L+ e++ +e+ + +++++ + + + + ++++ p+ a lc++Ad++L++iV+W+ks +lFk+++v+ KWMTBOMO08726 499 RVTPDIPPLLQEIMDVEHLWQYNESELNRlG-SSPGSPSanpllaasgitAQNSNPDFLADLCNIADHRLYKIVKWCKSLPLFKNISVS 586 4566778888888777776555555554431.22222222456666677788999********************************96 PP |
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