Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
---|---|---|---|---|---|
KWMTBOMO08275 | zf-C2H2 | 6e-16 | 0.00086 | 5 | + View |
HMM length of domain: 23 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 7.6 0.2 0.092 5.5 6 21 136 152 2 19.6 2.0 1.4e-05 0.00086 1 23 160 182 3 17.1 2.3 8.4e-05 0.005 1 23 188 210 4 19.0 4.9 2.2e-05 0.0013 1 23 216 238 5 16.0 2.8 0.0002 0.012 1 23 244 267 Alignments for each domain: == domain 1 score: 7.6 bits; conditional E-value: 0.092 TT.EEESSHHHHHHHHH CS zf-C2H2 6 Cg.ksFkrksnLkrHir 21 Cg + F +++ L+rH+ KWMTBOMO08275 136 CGgREFQHQYTLMRHLP 152 888************85 PP == domain 2 score: 19.6 bits; conditional E-value: 1.4e-05 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 + C CgksF++ s L +H+ +H KWMTBOMO08275 160 FHCVTCGKSFRQLSTLSQHRAIH 182 78******************998 PP == domain 3 score: 17.1 bits; conditional E-value: 8.4e-05 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y C++C+k+F+r s L +H +tH KWMTBOMO08275 188 YACEVCNKTFNRVSTLISHCKTH 210 88*****************9988 PP == domain 4 score: 19.0 bits; conditional E-value: 2.2e-05 EEETTTTEEESSHHHHHHHHHCC CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23 y+C+ C+k F +k nL++H+ tH KWMTBOMO08275 216 YRCHLCPKGFHQKGNLRNHLFTH 238 9*******************999 PP == domain 5 score: 16.0 bits; conditional E-value: 0.0002 EEETTTTEEESSHHHHHHHHHC.C CS zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23 y+C++C k F+++snL+ H ++ H KWMTBOMO08275 244 YRCNICFKGFNQQSNLVCHKNKaH 267 9****************9999988 PP |
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