Gene

KWMTBOMO07638

Pre Gene Modal

BGIBMGA001296

Annotation

PREDICTED:_DNA-binding_protein_D-ETS-4_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr13(-):2430741-2480340      View in EpiBrowser

Full name

DNA-binding protein D-ETS-4      

Transcription factor

ETS

Location in the cell

Nuclear   Reliability : 4.781

CDS

ATGCCACAAACCGTGCCGCGGTCCGGGTGCAGCCCGCCTTCAGCATCACAAGGCGAGAGAGCTGTCCCCACGTCTCCAGCTGATCTACAGCACCTGCTCCGTTTATTAGGGGCCTCGTCGCCGCCAGAATCCATGCTCCACTCTCCACCGAACCTACACACAAAACCTCCGCCACCATATCCAGAGGATAATAACTTCTTGGACAGGCTGTACGATTTTGAAGGATATCCTACCCCGTCTCCTTCGTCAGACGAAGGCTCGATTCCCACGGTGGCGCTGCAACCATCTTCCCCGTACAGTTCACTGCACTACACAACACCAGTGTATATCAAAGAAGAACCAAACAGACTGTCTGTGCCTGGATTTGCCTCACCCTACCCTCTGTCGCCTTCTGGATCCTGTGTATCTTATGGAAGCCATAATCAGTATCCTTCGCCTACACCTCAACCCGAAGAATATATTGACATCGAGCAATTATTAAAAGAGAATCAAATATTACAAGACAGCACACAGCATAGTTACATAACCCCTAAAACAGAGATAGAAGAACCAAGAGATCATATATTATTGAGATCAGTACTCGAAGATACCACATTCCAGAAGAGATTCAATCTTAGACCTGTGCCTTTAGAGTTGGGAAACGTGAAAATGGAGGAGAGCAGTGGTGGTGACGACCTGGTGGCACCGGATATTGATCGTGTGCTGTCGATGGCCATTGAACAATCTAAGAGGGATGTGGATAGCACTTGCACAGTCCTCGGAATATCGCCAGATCCAATGCTTTGGAGTACAGCGGATGTCAAAGCTTGGGTGATGTTTACATTGCAACATTTCAACCAGCCATTAGTACCGTCCGAGTATTTCAATATGGACGGGGCTGCACTGGTGGCTCTTACAGAAGAAGAATTCAACCAGAGAGCTCCTCAGTCGGGAAGCACTCTGTATGCTCAGCTGGAAATATGGAAGGCAGCAAGACACGAGTCGTGGAAGACTTCTCAGTGGACTGACCATCAACCTTCGCCTACACCTGTACCGGCCGCGTTACCCTCAGCCGACGATATGAGTGAAGATGAAGATTCAGAGTCAGCCGGTACCAGTGCGGGAACAACGGTAGGAAAGGCTAAAACTGGCAGCACGCATATACACCTTTGGCAATTCTTGAAAGAGCTTCTAGCTTCGCCCCACATACACGGGTCGGCGATACGATGGCTAGATAGAAGTAACGGTGTCTTCAAGATCGAAGATTCAGTACGCGTCGCGAGGCTCTGGGGCAAGAGAAAGAATAGGCCCGCGATGAACTACGACAAGTTGTCGCGTAGCATCAGGCAGTACTACAAGAAGGGTATTATGAAGAAAACCGAGCGAAGTCAGAGGCTTGTCTACCAGTTCTGCCATCCGTACTGTTTGTGA

Protein

MPQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTVALQPSSPYSSLHYTTPVYIKEEPNRLSVPGFASPYPLSPSGSCVSYGSHNQYPSPTPQPEEYIDIEQLLKENQILQDSTQHSYITPKTEIEEPRDHILLRSVLEDTTFQKRFNLRPVPLELGNVKMEESSGGDDLVAPDIDRVLSMAIEQSKRDVDSTCTVLGISPDPMLWSTADVKAWVMFTLQHFNQPLVPSEYFNMDGAALVALTEEEFNQRAPQSGSTLYAQLEIWKAARHESWKTSQWTDHQPSPTPVPAALPSADDMSEDEDSESAGTSAGTTVGKAKTGSTHIHLWQFLKELLASPHIHGSAIRWLDRSNGVFKIEDSVRVARLWGKRKNRPAMNYDKLSRSIRQYYKKGIMKKTERSQRLVYQFCHPYCL

Description

May have a role in germline development.

Similarity

Belongs to the ETS family.

Keywords

Complete proteome   DNA-binding   Nucleus   Reference proteome  

Feature

chain  DNA-binding protein D-ETS-4

Uniprot

H9IVL6   A0A2A4JB91   A0A2H1V314   A0A2A4J9D6   A0A2A4J9Q3   A0A2A4JBC0   + More
A0A2A4JAX8   A0A194PCZ8   A0A0L7KZ20   A0A0N1PJF9   A0A2A4JAA8   A0A1B6FWS9   A0A2J7PQB0   A0A2J7PQB9   A0A1B6FN83   A0A1B6LC17   D2A0N6   A0A0C9QI27   E2ATR9   A0A1B6E6Z2   A0A232FHS1   A0A0M8ZZI6   A0A1Y1JT39   A0A154PEV4   A0A2P8YSM0   N6TJ88   A0A1B0CUK7   A0A1L8DIE6   A0A1L8DI42   A0A0R1EB89   B4PRA4   A0A0B4LHS8   B7FNJ4   P29775   Q29QW5   D5SHS7   A0A1W4VKT9   A0A1W4V8P9   B4IGV9   A0A0P9AT22   B3LX26   B4NAS5   A0A1A9ULY8   A0A1S4F9Z0   Q17AZ6   W8ANS1  

Pubmed

19121390    26354079    26227816    18362917    19820115    20798317    + More
28648823    28004739    29403074    23537049    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    1577186    18057021    17510324    24495485   

EMBL

BABH01001413    BABH01001414    BABH01001415    NWSH01002282    PCG68692.1    ODYU01000237    + More
SOQ34674.1    PCG68695.1    PCG68691.1    PCG68693.1    PCG68694.1    KQ459606    KPI91102.1    JTDY01004160    KOB68513.1    KQ459836    KPJ19773.1    PCG68696.1    GECZ01015113    JAS54656.1    NEVH01022640    PNF18523.1    PNF18524.1    GECZ01018148    GECZ01011633    JAS51621.1    JAS58136.1    GEBQ01018748    JAT21229.1    KQ971338    EFA02538.2    GBYB01014348    JAG84115.1    GL442691    EFN63152.1    GEDC01003597    JAS33701.1    NNAY01000198    OXU30070.1    KQ435794    KOX74107.1    GEZM01101628    JAV52432.1    KQ434879    KZC09964.1    PYGN01000386    PSN47225.1    APGK01023741    APGK01023742    APGK01023743    APGK01023744    APGK01023745    APGK01023746    APGK01023747    APGK01023748    APGK01023749    KB740512    ENN80509.1    AJWK01029307    AJWK01029308    AJWK01029309    AJWK01029310    GFDF01007947    JAV06137.1    GFDF01007946    JAV06138.1    CM000160    KRK04279.1    KRK04280.1    EDW98468.1    AE014297    AHN57569.1    BT053684    ACK77599.1    M88474    BT024275    ABC86337.1    BT124878    ADG46046.1    CH480837    EDW49077.1    CH902617    KPU80505.1    KPU80506.1    EDV43865.1    CH964232    EDW80889.1    CH477328    EAT43418.1    GAMC01020437    JAB86118.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000037510    UP000053240    UP000235965    + More
UP000007266    UP000000311    UP000215335    UP000053105    UP000076502    UP000245037    UP000019118    UP000092461    UP000002282    UP000000803    UP000192221    UP000001292    UP000007801    UP000007798    UP000078200    UP000008820   

PRIDE

H9IVL6    P29775    Q29QW5   

Pfam

PF02198   SAM_PNT        + More
PF00178   Ets

Interpro

IPR003118   Pointed_dom        + More
IPR000418   Ets_dom       
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR013761   SAM/pointed_sf       

SUPFAM

SSF47769   SSF47769        + More
SSF46785   SSF46785       

Gene 3D

1.10.10.10     1.10.150.50    

ProteinModelPortal

H9IVL6   A0A2A4JB91   A0A2H1V314   A0A2A4J9D6   A0A2A4J9Q3   A0A2A4JBC0   + More
A0A2A4JAX8   A0A194PCZ8   A0A0L7KZ20   A0A0N1PJF9   A0A2A4JAA8   A0A1B6FWS9   A0A2J7PQB0   A0A2J7PQB9   A0A1B6FN83   A0A1B6LC17   D2A0N6   A0A0C9QI27   E2ATR9   A0A1B6E6Z2   A0A232FHS1   A0A0M8ZZI6   A0A1Y1JT39   A0A154PEV4   A0A2P8YSM0   N6TJ88   A0A1B0CUK7   A0A1L8DIE6   A0A1L8DI42   A0A0R1EB89   B4PRA4   A0A0B4LHS8   B7FNJ4   P29775   Q29QW5   D5SHS7   A0A1W4VKT9   A0A1W4V8P9   B4IGV9   A0A0P9AT22   B3LX26   B4NAS5   A0A1A9ULY8   A0A1S4F9Z0   Q17AZ6   W8ANS1  

PDB

1YO5     E-value=3.04069e-35,     Score=373

KEGG

101746525    K09442 SAM pointed domain-containing ETS transcription factor | (RefSeq) DNA-binding protein D-ETS-4

GO

GO:0043565   GO:0005634   GO:0003700   GO:0000981   GO:0006357   GO:0030154   GO:0006355   GO:0015074   GO:0005737   GO:0005488   GO:0022891   GO:0003707   GO:0051537  

Subcellular location

Nucleus  

Length:

469

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00021

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00314

outside

1  -  469

 

 

Pi

313.955913

Theta

192.053048

Tajima's D

2.131244

CLR

0.409796

CSRT

0.900154992250388

Interpretation

Uncertain