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| Gene | Transcription Factor Family | Full Seq Evalue | Best Domain Evalue | Domain Number | Alignment Detail |
|---|---|---|---|---|---|
| KWMTBOMO14310 | zf-C2H2 | 4.6e-39 | 0.0012 | 18 | + View |
HMM length of domain: 23 aa
c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified.
Domain annotation for each sequence:
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to
-- ----- ---- -------- -------- ------- ------ ------- ------
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 11.8 2.2 0.004 0.24 3 23 147 168
2 18.2 1.7 3.7e-05 0.0022 1 23 177 200
3 13.8 3.0 0.00097 0.058 1 23 212 235
4 12.9 1.4 0.0019 0.11 1 23 244 267
5 17.2 2.0 7.9e-05 0.0047 1 23 278 301
6 16.7 1.0 0.00011 0.0067 2 23 331 353
7 15.2 1.4 0.00034 0.02 2 23 363 385
8 9.0 1.2 0.032 1.9 2 19 390 407
9 15.1 0.0 0.00038 0.023 2 23 415 437
10 5.0 1.6 0.62 37 3 23 447 468
11 19.1 3.2 2e-05 0.0012 1 23 473 496
12 16.8 1.8 0.00011 0.0064 3 23 509 530
13 14.0 1.0 0.00086 0.052 1 23 556 579
14 8.1 0.2 0.064 3.8 2 23 586 607
15 12.3 2.1 0.003 0.18 2 23 614 635
16 4.5 1.5 0.85 51 3 23 643 665
17 8.5 0.2 0.046 2.7 1 23 701 723
18 7.3 2.6 0.11 6.7 1 23 729 752
Alignments for each domain:
== domain 1 score: 11.8 bits; conditional E-value: 0.004
ETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 3 CpdCgksFkrksnLkrHirt.H 23
C +C+ +Fk+ L H+++ H
KWMTBOMO14310 147 CQVCHLVFKSEKTLFMHQKRkH 168
********************99 PP
== domain 2 score: 18.2 bits; conditional E-value: 3.7e-05
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
++C++C++s+ +k +L++Hi++ H
KWMTBOMO14310 177 HVCDYCSMSYDSKNSLVAHIKRkH 200
79********************99 PP
== domain 3 score: 13.8 bits; conditional E-value: 0.00097
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
++C++C+ +Fk ks L+ H+ + H
KWMTBOMO14310 212 HTCEVCSLVFKGKSRLRMHMTRkH 235
79******************9999 PP
== domain 4 score: 12.9 bits; conditional E-value: 0.0019
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
++C++Cg + +L +Hi++ H
KWMTBOMO14310 244 HVCSECGLAYEKHRSLIVHIQRkH 267
79********************99 PP
== domain 5 score: 17.2 bits; conditional E-value: 7.9e-05
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
+ Cp C+k F+ ++ + rHi++ H
KWMTBOMO14310 278 FNCPFCTKIFSKRETYARHIQRkH 301
89********************99 PP
== domain 6 score: 16.7 bits; conditional E-value: 0.00011
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
+C++C+ +F++ Lk H+r+ H
KWMTBOMO14310 331 TCKECPLMFTSINYLKLHMRRkH 353
8********************99 PP
== domain 7 score: 15.2 bits; conditional E-value: 0.00034
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
kC +C+ s+ ++LkrH r+ H
KWMTBOMO14310 363 KCRICNLSYDKLESLKRHVRRkH 385
8********************99 PP
== domain 8 score: 9.0 bits; conditional E-value: 0.032
EETTTTEEESSHHHHHHH CS
zf-C2H2 2 kCpdCgksFkrksnLkrH 19
+C +C+k+F++k+ + +H
KWMTBOMO14310 390 YCRICKKKFNSKEAYLNH 407
6**************999 PP
== domain 9 score: 15.1 bits; conditional E-value: 0.00038
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
+C++Cg F + L +H+r+ H
KWMTBOMO14310 415 ECSICGLIFATEVGLAKHLRRlH 437
6********************99 PP
== domain 10 score: 5.0 bits; conditional E-value: 0.62
ETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 3 CpdCgksFkrksnLkrHirt.H 23
C++C++ F k +Lk H+++ H
KWMTBOMO14310 447 CNICNQGFHEKRQLKPHLMKvH 468
*****************99988 PP
== domain 11 score: 19.1 bits; conditional E-value: 2e-05
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y+C++C+k+ k+k++++rH+ H
KWMTBOMO14310 473 YTCKYCNKTLKTKESYRRHLILkH 496
9******************99888 PP
== domain 12 score: 16.8 bits; conditional E-value: 0.00011
ETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 3 CpdCgksFkrksnLkrHirt.H 23
C+ C++sFk+ +L++Hi+t H
KWMTBOMO14310 509 CSQCSESFKDEFELCKHINTvH 530
********************99 PP
== domain 13 score: 14.0 bits; conditional E-value: 0.00086
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
y+C++C++++ ++ +Lk H H
KWMTBOMO14310 556 YQCTKCSETYVTWNQLKLHFEQnH 579
9******************76655 PP
== domain 14 score: 8.1 bits; conditional E-value: 0.064
EETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirt.H 23
+C +Cg+ + +L++H++ H
KWMTBOMO14310 586 QCQVCGEIV-STKELNKHMKAkH 607
7********.999******9888 PP
== domain 15 score: 12.3 bits; conditional E-value: 0.003
EETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 2 kCpdCgksFkrksnLkrHirtH 23
kC++C ++ ++k +L++H +H
KWMTBOMO14310 614 KCNYCEYRTTSKVSLTQHTLRH 635
8*******************99 PP
== domain 16 score: 4.5 bits; conditional E-value: 0.85
ET..TTTEEESSHHHHHHHHHCC CS
zf-C2H2 3 Cp..dCgksFkrksnLkrHirtH 23
C+ +C ++ + +++H r+H
KWMTBOMO14310 643 CEfnGCRYKTYYPGAMEKHKRKH 665
77779**9999***********9 PP
== domain 17 score: 8.5 bits; conditional E-value: 0.046
EEETTTTEEESSHHHHHHHHHCC CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirtH 23
y C+ C++ + nL++H +H
KWMTBOMO14310 701 YMCDQCDYATILPANLVQHKYKH 723
89*****************9998 PP
== domain 18 score: 7.3 bits; conditional E-value: 0.11
EEETTTTEEESSHHHHHHHHHC.C CS
zf-C2H2 1 ykCpdCgksFkrksnLkrHirt.H 23
+kC++C+ k + +L+ H r+ H
KWMTBOMO14310 729 FKCEVCSFATKYNTSLRFHVRKkH 752
8********************999 PP
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渝公网安备 50010602502065号