HMM length of domain: 198 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	64.9	21.0	2.2e-21	7.4e-18	1	181	37	207
2	4.2	0.3	0.009	30	2	22	194	218

  Alignments for each domain:
  == domain 1  score: 64.9 bits;  conditional E-value: 2.2e-21
  TRAM_LAG1_CLN8   1 kfdervvslvqyllstvfglivlssspelwegyperilgathfllkayyllalgYfiydllvlllyekkrkdfvemliHhiitlvllvlsyv.rn 94 
                     +++ r+v l++ +++tv+gl+ +  +      +p r + +t  + +a++l ++gYf  dll++++y+   +d+++ml+Hh+++lv +++ +   +
   KWMTBOMO07464  37 EWCSRAVTLLHGSVATVVGLYQCGAEA----ITPCRLTMKTTPWHYALMLWSWGYFAFDLLWCFVYW---GDHYLMLVHHTSALVAVTVYTQkDY 124
                     6999*******************9997....5566666666666666******************77...578********77777776666477 PP

  TRAM_LAG1_CLN8  95 lgrvglvvlllhelsdpflnlrkilsylkkkskssklvlfngllfllsFfvcRlvllpylillsildvaklslstaplwlpliflil 181
                      g+ ++++l   e+++p+l lr++l+   ++  +++l+ ++++++l++F+++R +l++y +++    +   ++ + +l + ++++++
   KWMTBOMO07464 125 TGCTFACTLAFLEVTNPLLQLRWFLKSN-GY-AKTVLYTMVEVTYLVTFLFVRGILGTYIMMRILKSDI-FDVDE-KLISLVFYIVS 207
                     78889999999*****************.66.455899999******************7766555443.34443.34444444444 PP

  == domain 2  score: 4.2 bits;  conditional E-value: 0.009
  TRAM_LAG1_CLN8   2 fdervvslvqyllstvfgl....iv 22 
                     +de+++slv+y++s++f +    +v
   KWMTBOMO07464 194 VDEKLISLVFYIVSVAFIYdivgYV 218
                     6889999999999999888544444 PP