Silkworm Genome Informatics Database

Found: 1 items

Gene	Transcription Factor Family	Full Seq Evalue	Best Domain Evalue	Domain Number	Alignment Detail
KWMTBOMO07186	DACH	5.9e-39	5.9e-39	2	+ View
HMM length of domain: 172 aa c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs. i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. Domain annotation for each sequence: # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to -- ----- ---- -------- -------- ------- ------ ------- ------ --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 133.3 6.7 3.5e-43 5.9e-39 40 156 235 353 2 -0.5 0.2 0.045 7.6e+02 90 133 418 433 Alignments for each domain: == domain 1 score: 133.3 bits; conditional E-value: 3.5e-43 DACH 40 dsl.ssvetlltniqgllkvaldnariqekqvqlekkelklellrerelretlekqlavelksraivqkrlkkekkakrklqealefeskrreqve 134 d+l ss etll niqgllkva dnar qe+q+ ek elk+++lrere++++le+ql e+k r i qkrlkke+k ++ +qe l++e krr+++e KWMTBOMO07186 235 DTLvSSTETLLRNIQGLLKVAADNARQQERQISYEKAELKMDVLREREVKDNLERQLVDEQKLRVIYQKRLKKERKQRQVVQEQLDIELKRRQKIE 330 554399**************************************************************************************** PP DACH 135 qalkqaasad.slrvlkdslipe 156 +alkq+ + + lr++ + l p KWMTBOMO07186 331 EALKQSGAPQeILRIVTENLSPA 353 *9887659999999885 PP == domain 2 score: -0.5 bits; conditional E-value: 0.045 DACH 90 tlekqlavelksraivqkrlkkekkakrklqealefeskrreqv 133 +l ++ le+e k r+q+ KWMTBOMO07186 418 SLAQE----------------------------LEMERKSRQQA 433 44444............................55555555554 PP

Gene

Transcription Factor Family

Full Seq Evalue

Best Domain Evalue

Domain Number

Alignment Detail

KWMTBOMO07186

DACH

5.9e-39

+ View

						  HMM length of domain: 172 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	133.3	6.7	3.5e-43	5.9e-39	40	156	235	353
2	-0.5	0.2	0.045	7.6e+02	90	133	418	433

  Alignments for each domain:
  == domain 1  score: 133.3 bits;  conditional E-value: 3.5e-43
           DACH  40 dsl.ssvetlltniqgllkvaldnariqekqvqlekkelklellrerelretlekqlavelksraivqkrlkkekkakrklqealefeskrreqve 134
                    d+l ss etll niqgllkva dnar qe+q+  ek elk+++lrere++++le+ql  e+k r i qkrlkke+k ++ +qe l++e krr+++e
  KWMTBOMO07186 235 DTLvSSTETLLRNIQGLLKVAADNARQQERQISYEKAELKMDVLREREVKDNLERQLVDEQKLRVIYQKRLKKERKQRQVVQEQLDIELKRRQKIE 330
                    554399****************************************************************************************** PP

           DACH 135 qalkqaasad.slrvlkdslipe 156
                    +alkq+ + +  lr++ + l p 
  KWMTBOMO07186 331 EALKQSGAPQeILRIVTENLSPA 353
                    *****98876599**99999885 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.045
           DACH  90 tlekqlavelksraivqkrlkkekkakrklqealefeskrreqv 133
                    +l ++                            le+e k r+q+
  KWMTBOMO07186 418 SLAQE----------------------------LEMERKSRQQA 433
                    44444............................55555555554 PP