HMM length of domain: 23 aa

c-Evalue (conditional Evalue): It is an attempt to measure the statistical significance of each domain, given that we’ve already decided that the target sequence is a true homolog. It is the expected number of additional domains we’d find with a domain score this big in the set of sequences reported in the top hits list, if those sequences consisted only of random nonhomologous sequence outside the region that sufficed to define them as homologs.
i-Evalue (independent Evalue): The significance of the sequence in the whole database search, if this were the only domain we had identified. 
Domain annotation for each sequence:
#	score	bias	c-Evalue	i-Evalue	hmmfrom	hmm to	alifrom	ali to
--	-----	----	--------	--------	-------	------	-------	------
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
1	20.9	0.1	5.3e-06	0.00032	1	23	264	286
2	21.5	0.3	3.4e-06	0.0002	1	23	292	316
3	11.3	0.1	0.0058	0.35	2	23	412	433

  Alignments for each domain:
  == domain 1  score: 20.9 bits;  conditional E-value: 5.3e-06
                    EEETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirtH 23 
                    ++C++Cgk   rk+ L+ H+r+H
  KWMTBOMO07110 264 FECTVCGKGLARKDKLTIHMRIH 286
                    89********************9 PP

  == domain 2  score: 21.5 bits;  conditional E-value: 3.4e-06
                    EEETTTTEEESSHHHHHHHHHC..C CS
        zf-C2H2   1 ykCpdCgksFkrksnLkrHirt..H 23 
                    y+C++C+k F r++ L+ H+++  H
  KWMTBOMO07110 292 YVCEVCNKAFARRDKLVLHMNKlkH 316
                    9*******************98666 PP

  == domain 3  score: 11.3 bits;  conditional E-value: 0.0058
                    EETTTTEEESSHHHHHHHHHCC CS
        zf-C2H2   2 kCpdCgksFkrksnLkrHirtH 23 
                     C+ Cg+ F ++++  +H ++H
  KWMTBOMO07110 412 SCELCGRLFATRDEWSAHAKSH 433
                    6*******************99 PP